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SCNpilot_cont_500_bf_scaffold_6883

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6883_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1100)
DNA (1098bp) protein (366aa)
Rare lipoprotein A n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYT8_HYPDA rbh
lipoprotein A; K03642 rare lipoprotein A rbh
Rare lipoprotein A {ECO:0000313|EMBL:ADJ23540.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_6883_trna_1
unknown

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1337..1421
DNA (85bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_6883_2
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1536..2771
DNA (1236bp) protein (412aa)
Phage-related integrase n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CFR0_AGRT5
int; phage-related integrase
Phage-related integrase {ECO:0000313|EMBL:AAK89578.1}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
SCNpilot_cont_500_bf_scaffold_6883_3
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2771..4306
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC15_9MICO
Uncharacterized protein {ECO:0000313|EMBL:BAQ16966.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6883_4
unknown

Not on your lists

4303..4485
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4497..5849
DNA (1353bp) protein (451aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
RNA-splicing ligase RtcB n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WSF5_9BRAD rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_6883_6
unknown

Not on your lists

5854..6063
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6060..7649
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0002FAD0C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY32283.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
SCNpilot_cont_500_bf_scaffold_6883_8
unknown

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7650..7949
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_9
unknown

Not on your lists

7951..8214
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_10
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8211..8657
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JI17_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64428.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_6883_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8654..9406
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVU0_HYPDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ22979.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_6883_12
unknown

Not on your lists

9450..9782
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_13
unknown

Not on your lists

9779..10246
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_14
unknown

Not on your lists

10246..10512
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_15
unknown

Not on your lists

10633..11052
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_16
unknown

Not on your lists

11045..11323
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11320..11730
DNA (411bp) protein (137aa)
Repressor lexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
LexA repressor n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPZ6_THISH
SCNpilot_cont_500_bf_scaffold_6883_18
unknown

Not on your lists

11727..12023
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_19
unknown

Not on your lists

12066..12326
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6883_20
Morganella morganii, Morganella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12319..12693
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Providencia stuartii (strain MRSN 2154) RepID=I0DXX4_PROSM
Uncharacterized protein {ECO:0000313|EMBL:KGP43096.1}; TaxID=582 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Morganella.;" source="Morganella morganii (Proteus morganii).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6883_21
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12690..13064
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) RepID=B7J7I9_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:KES23123.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6883_22
unknown

Not on your lists

13061..13438
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000373F391
Displaying 23 items

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