ggKbase home page

SCNpilot_cont_500_bf_scaffold_4523

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4523_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..322
DNA (321bp) protein (107aa)
metallo-beta-lactamase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C5BB6
Metallo-beta-lactamase {ECO:0000313|EMBL:AKD56351.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
beta-lactamase
SCNpilot_cont_500_bf_scaffold_4523_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

350..1048
DNA (699bp) protein (233aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] rbh
phosphatidylserine synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036DD1D1 rbh
CDP-diacylglycerol/serineO-phosphatidyltransfera se {ECO:0000313|EMBL:ADB39026.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_4523_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1102..1353
DNA (252bp) protein (84aa)
phosphoribosylformylglycinamidine synthase PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (st
phosphoribosylformylglycinamidine synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI000362C78F
SCNpilot_cont_500_bf_scaffold_4523_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1521..2528
DNA (1008bp) protein (336aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
3-oxoacyl-ACP synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI000375DE30 rbh
SCNpilot_cont_500_bf_scaffold_4523_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2596..2973)
DNA (378bp) protein (126aa)
CoA-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360CC19
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39029.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_4523_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3984..7889)
DNA (3906bp) protein (1302aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003755D70 rbh
Histidine kinase {ECO:0000313|EMBL:AKD56357.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_4523_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7973..8269)
DNA (297bp) protein (99aa)
adhesin n=1 Tax=Spirosoma panaciterrae RepID=UPI00038001E0
Adhesin {ECO:0000313|EMBL:AKD56358.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
HesB/YadR/YfhF-family protein
SCNpilot_cont_500_bf_scaffold_4523_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8388..8912
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C2648 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD56359.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4523_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8966..9808)
DNA (843bp) protein (281aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] rbh
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000362C174 rbh
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AKD56360.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_4523_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9805..10155)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E128C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39035.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_4523_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10262..10945)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036887E9 rbh
hypothetical protein rbh
TPR repeat-containing protein {ECO:0000313|EMBL:ADB39036.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_4523_12
unknown

Not on your lists

comp(11060..11218)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4523_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12039..12449
DNA (411bp) protein (137aa)
galactokinase; K00849 galactokinase [EC:2.7.1.6]
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
galactokinase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377F46F
SCNpilot_cont_500_bf_scaffold_4523_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12524..13183
DNA (660bp) protein (220aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] rbh
transaldolase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FC957 rbh
SCNpilot_cont_500_bf_scaffold_4523_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13278..13958
DNA (681bp) protein (227aa)
phosphonate ABC transporter ATP-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370B1CC rbh
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKD56365.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ABC transporter; K09812 cell division transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_4523_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13994..14932
DNA (939bp) protein (313aa)
xylose isomerase; K03335 inosose dehydratase [EC:4.2.1.44] rbh
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI000360201C rbh
Xylose isomerase {ECO:0000313|EMBL:AKD56681.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_4523_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15026..15499
DNA (474bp) protein (158aa)
ferritin Dps family protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036AECA7 rbh
Dps family ferritin {ECO:0000313|EMBL:AKD56682.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ferritin Dps family protein; K04047 starvation-inducible DNA-binding protein
SCNpilot_cont_500_bf_scaffold_4523_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15583..16770
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CAA8F rbh
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:AKD56683.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
mntH; natural resistance-associated macrophage protein rbh
SCNpilot_cont_500_bf_scaffold_4523_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16814..17683)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BE58F rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB36779.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying 19 items

View Taxonomy