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SCNpilot_cont_500_bf_scaffold_4819

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4819_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..1082)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBW8_SPILD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB39703.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_4819_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1173..3623)
DNA (2451bp) protein (817aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEQ9_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW00495.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4819_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3835..4872
DNA (1038bp) protein (346aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER0_NIAKG rbh
putative signal transduction histidine kinase rbh
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW00496.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_4819_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4877..5308
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374DEDE
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:AKD57350.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
LytTR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4819_5
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5626..6330)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000349FB8A
Chemotaxis protein CheY {ECO:0000313|EMBL:EZH75404.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
LytTR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4819_6
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6299..7426)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000344DBC4 rbh
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EOR31167.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
signal transduction histidine kinase LytS
SCNpilot_cont_500_bf_scaffold_4819_7
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7632..8537
DNA (906bp) protein (302aa)
Cell wall-associated protease (EC:3.4.21.-)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000364640C
Protease {ECO:0000313|EMBL:GAL60576.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
SCNpilot_cont_500_bf_scaffold_4819_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8509..9000
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000378560D
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CCH55293.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
subtilisin-like serine protease
SCNpilot_cont_500_bf_scaffold_4819_9
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9037..9747)
DNA (711bp) protein (237aa)
chemotaxis protein CheY n=1 Tax=Pontibacter roseus RepID=UPI00036C298F
Chemotaxis protein CheY {ECO:0000313|EMBL:AKD04438.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
LytTR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4819_10
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9760..10794)
DNA (1035bp) protein (345aa)
Signal transduction histidine kinase LytS n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FME3_9BACT
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EJF11541.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
signal transduction histidine kinase, lyts
SCNpilot_cont_500_bf_scaffold_4819_11
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11000..11911
DNA (912bp) protein (304aa)
ABC transporter, ATP-binding protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZR56_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD04440.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sulfate-transporting ATPase; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_4819_12
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11908..12690
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3Z019_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:AKD04441.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4819_13
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12709..13704)
DNA (996bp) protein (332aa)
PAP7; acid phosphatase (EC:3.1.3.2) rbh
Acid phosphatase {ECO:0000313|EMBL:CCH03510.1}; EC=3.1.3.2 {ECO:0000313|EMBL:CCH03510.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Acid phosphatase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KHA7_9BACT rbh
SCNpilot_cont_500_bf_scaffold_4819_14
unknown

Not on your lists

comp(13694..14098)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4819_15
unknown

Not on your lists

comp(14148..14447)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003807156
SCNpilot_cont_500_bf_scaffold_4819_16
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14612..15217)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037C2B91
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03504.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_4819_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15267..16076)
DNA (810bp) protein (270aa)
Putative response regulatory protein ypdB n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K961_9BACT
putative response regulatory protein ypdB
Putative response regulatory protein ypdB {ECO:0000313|EMBL:CCH00664.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_4819_18
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16121..16345)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KH98_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03501.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Displaying 18 items

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