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SCNpilot_cont_500_bf_scaffold_5099

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5099_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2..1297)
DNA (1296bp) protein (432aa)
GH3 auxin-responsive promoter n=1 Tax=Spirosoma panaciterrae RepID=UPI0003746750 rbh
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AKD55309.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
GH3 auxin-responsive promoter rbh
SCNpilot_cont_500_bf_scaffold_5099_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1369..2145)
DNA (777bp) protein (259aa)
stationary-phase survival protein SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] rbh
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
stationary phase survival protein SurE n=1 Tax=Spirosoma panaciterrae RepID=UPI00036535D0 rbh
SCNpilot_cont_500_bf_scaffold_5099_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2358..3236
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035DF6C6 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AKD55312.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
transcriptional regulator, LysR family
SCNpilot_cont_500_bf_scaffold_5099_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3301..4500
DNA (1200bp) protein (400aa)
Threonine synthase {ECO:0000313|EMBL:AKD55313.1}; EC=4.2.3.1 {ECO:0000313|EMBL:AKD55313.1};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] rbh
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F6422 rbh
SCNpilot_cont_500_bf_scaffold_5099_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4569..5612)
DNA (1044bp) protein (348aa)
sulfurtransferase n=1 Tax=Spirosoma spitsbergense RepID=UPI0003732E52 rbh
UPF0176 protein SD10_10780 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
rhodanese; K07146 UPF0176 protein
SCNpilot_cont_500_bf_scaffold_5099_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5658..6299
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003636B87 rbh
deoxynucleoside kinase rbh
Deoxynucleoside kinase {ECO:0000313|EMBL:ADB37719.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5099_7
unknown

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comp(6561..6728)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5099_8
unknown

Not on your lists

7539..7850
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003816030
SCNpilot_cont_500_bf_scaffold_5099_9
unknown

Not on your lists

8094..8363
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D1321
SCNpilot_cont_500_bf_scaffold_5099_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8586..8933
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380BF0C
Uncharacterized protein {ECO:0000313|EMBL:AKD55242.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
response regulator receiver protein
SCNpilot_cont_500_bf_scaffold_5099_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9343..10320)
DNA (978bp) protein (326aa)
Trehalose utilization n=1 Tax=Spirosoma panaciterrae RepID=UPI000362600D rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB36655.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5099_12
unknown

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comp(10545..11834)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036169BF rbh
SCNpilot_cont_500_bf_scaffold_5099_trna_2
unknown

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comp(12060..12141)
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_5099_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12294..12707
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A99F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37730.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5099_trna_1
unknown

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comp(12795..12867)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_5099_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12924..13667
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CC306 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37731.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5099_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13740..14549)
DNA (810bp) protein (270aa)
short-chain dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000379795C rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB37732.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5099_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14627..15322)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037961C2 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD55330.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
Displaying 18 items

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