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SCNpilot_cont_500_bf_scaffold_5870

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5870_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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226..2160
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003736E89 rbh
histidine kinase rbh
Histidine kinase {ECO:0000313|EMBL:ADB42396.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_2
unknown

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comp(2215..2640)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5870_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2831..3292)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037896AF
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB42398.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3564..4037)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A8928
hypothetical protein; K03699 putative hemolysin
Uncharacterized protein {ECO:0000313|EMBL:ADB37517.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4037..4942)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A8928 rbh
hypothetical protein; K03699 putative hemolysin rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37517.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4995..5705
DNA (711bp) protein (237aa)
NUDIX hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI000375EFF5 rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:ADB37516.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_7
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6069..6296)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I0C8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB03204.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_cont_500_bf_scaffold_5870_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6600..7442)
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLQ3_9BACT rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH54829.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transcriptional regulator, AraC family
SCNpilot_cont_500_bf_scaffold_5870_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7519..8427
DNA (909bp) protein (303aa)
NAD(P)H azoreductase {ECO:0000313|EMBL:CCH54828.1}; EC=1.7.-.- {ECO:0000313|EMBL:CCH54828.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
azoB; NAD(P)H azoreductase (EC:1.7.-.-) rbh
NAD(P)H azoreductase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLQ2_9BACT rbh
SCNpilot_cont_500_bf_scaffold_5870_10
unknown

Not on your lists

8464..8586
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5870_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8537..9010)
DNA (474bp) protein (158aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
phosphopantetheine adenylyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036516CC rbh
SCNpilot_cont_500_bf_scaffold_5870_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9075..9965)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000366471C rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD55861.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5870_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10028..10522)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003748BAE
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADB37513.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10656..11090)
DNA (435bp) protein (145aa)
histidine kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI000366CE02
Histidine kinase {ECO:0000313|EMBL:AKD55862.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
signal transduction protein with CBS domains
SCNpilot_cont_500_bf_scaffold_5870_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11266..12759
DNA (1494bp) protein (498aa)
exonuclease V subunit alpha n=1 Tax=Spirosoma panaciterrae RepID=UPI00036224E3 rbh
exonuclease V subunit alpha rbh
Exonuclease V subunit alpha {ECO:0000313|EMBL:ADB37511.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12775..13407
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B6AFC rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD55864.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5870_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13472..14905)
DNA (1434bp) protein (478aa)
heat shock protein Hsp90 n=1 Tax=Spirosoma panaciterrae RepID=UPI000371AE26 rbh
ATP-binding protein; K04079 molecular chaperone HtpG rbh
Chaperone protein HtpG {ECO:0000256|SAAS:SAAS00218406}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15458..15826
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368FA1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37508.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15857..16177
DNA (321bp) protein (107aa)
sulfurtransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI000376A443
rhodanese
Rhodanese domain-containing protein {ECO:0000313|EMBL:ADB37507.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_5870_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16397..17176)
DNA (780bp) protein (260aa)
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] rbh
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
diaminopimelate epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI000376A1E5 rbh
SCNpilot_cont_500_bf_scaffold_5870_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(17253..17435)
DNA (183bp) protein (61aa)
50S ribosomal protein L19 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003807F59
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying 21 items

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