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SCNpilot_cont_500_bf_scaffold_2294

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2294_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..400
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B74B1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41522.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2294_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

414..1223
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360C9F7 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41521.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2294_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1372..2289)
DNA (918bp) protein (306aa)
sugar kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI000378B9A1 rbh
PfkB domain-containing protein rbh
PfkB domain protein {ECO:0000313|EMBL:ADB41520.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2294_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2374..3600)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000369824D rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57988.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_2294_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3828..5321
DNA (1494bp) protein (498aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
cysteinyl-tRNA synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377E629 rbh
SCNpilot_cont_500_bf_scaffold_2294_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5425..6189
DNA (765bp) protein (255aa)
glutamine cyclotransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CAD9E rbh
Peptidase {ECO:0000313|EMBL:AKD57990.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
peptidase M28 rbh
SCNpilot_cont_500_bf_scaffold_2294_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6453..6893
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000366FA46
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41516.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2294_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6912..7484)
DNA (573bp) protein (191aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] rbh
nicotinic acid mononucleotide adenylyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C59C9 rbh
SCNpilot_cont_500_bf_scaffold_2294_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7596..8195)
DNA (600bp) protein (200aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] rbh
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
guanylate kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EB85F rbh
SCNpilot_cont_500_bf_scaffold_2294_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8286..8570)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FAE7A
Uncharacterized protein {ECO:0000313|EMBL:CCH56527.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2294_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8652..9359)
DNA (708bp) protein (236aa)
RNA polymerase sigma factor RpoE n=1 Tax=Spirosoma panaciterrae RepID=UPI000380CEC6 rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB41512.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2294_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9606..10103)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380FAA1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41511.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2294_13
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10206..10973)
DNA (768bp) protein (256aa)
Fe-S oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI000371F5CF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG98238.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_2294_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11100..12476)
DNA (1377bp) protein (459aa)
transmembrane (4fe-4S) cluster-binding oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035DA008 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41509.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2294_trna_1
unknown

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12619..12691
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2294_15
unknown

Not on your lists

comp(12630..12758)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2294_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12922..14367)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003720944 rbh
DNA mismatch repair protein MutS {ECO:0000313|EMBL:AKD57997.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
DNA mismatch repair protein MutS rbh
SCNpilot_cont_500_bf_scaffold_2294_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14771..15187)
DNA (417bp) protein (139aa)
Ferric uptake regulator, Fur family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRS5_SPILD
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ADB41507.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying 18 items

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