ggKbase home page

SCNpilot_cont_500_bf_scaffold_2495

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2495_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..125)
DNA (123bp) protein (41aa)
macrolide ABC transporter ATP-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037ECAC1
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKD58174.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2495_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(224..3202)
DNA (2979bp) protein (993aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D1E37 rbh
hypothetical protein rbh
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ADB41094.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3312..4892)
DNA (1581bp) protein (527aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] rbh
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003690E24 rbh
SCNpilot_cont_500_bf_scaffold_2495_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5217..6692
DNA (1476bp) protein (492aa)
ATP synthase F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
F0F1 ATP synthase subunit beta n=1 Tax=Spirosoma panaciterrae RepID=UPI0003769CAB rbh
SCNpilot_cont_500_bf_scaffold_2495_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6807..7442
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EE622 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD58171.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2495_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7527..7772
DNA (246bp) protein (82aa)
H+transporting two-sector ATPase delta/subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase subunit epsilon n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C3957
H+transporting two-sector ATPase delta/epsilon subunit {ECO:0000313|EMBL:ADB41098.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7929..8546
DNA (618bp) protein (206aa)
phosphoribulokinase/uridine kinase; K00876 uridine kinase [EC:2.7.1.48] rbh
uridine kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI000370A8B8 rbh
Uridine kinase {ECO:0000313|EMBL:AKD58169.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_2495_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8570..9625)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003630F4E rbh
Oxidoreductase {ECO:0000313|EMBL:AKD58168.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE rbh
SCNpilot_cont_500_bf_scaffold_2495_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9808..10797
DNA (990bp) protein (330aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
quinolinate synthetase complex subunit alpha; K03517 quinolinate synthase [EC:2.5.1.72] rbh
quinolinate synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036F1FAB rbh
SCNpilot_cont_500_bf_scaffold_2495_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10831..11061
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003806849
Uncharacterized protein {ECO:0000313|EMBL:CCH54563.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2495_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11045..11416
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000363C104
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
SCNpilot_cont_500_bf_scaffold_2495_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11424..13016
DNA (1593bp) protein (531aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16] rbh
L-aspartate oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C68BF rbh
SCNpilot_cont_500_bf_scaffold_2495_13
unknown

Not on your lists

13114..13296
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368F62E
SCNpilot_cont_500_bf_scaffold_2495_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13262..13783
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037419A8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41110.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13816..15189
DNA (1374bp) protein (458aa)
glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamate--ammonia ligase {ECO:0000313|EMBL:ADB41111.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ADB41111.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
glutamine synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI000375DA27 rbh
SCNpilot_cont_500_bf_scaffold_2495_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15297..16337
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003703DCE rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD58164.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2495_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16437..17024
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003760193 rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB41113.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17423..17974
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BECB8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41115.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18023..18847
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D3112 rbh
hypothetical protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_2495_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18852..19406
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003666334 rbh
MORN variant repeat-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_2495_21
unknown

Not on your lists

comp(19465..19617)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2495_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20074..20610)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRX6_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41558.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20618..21391)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRX7_SPILD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41559.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21388..22113)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRX8_SPILD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41560.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22113..22811)
DNA (699bp) protein (233aa)
ABC transporter related protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRX9_SPILD rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADB41561.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_26
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23328..23627
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003744E08
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEI48879.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_500_bf_scaffold_2495_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23672..24370
DNA (699bp) protein (233aa)
haloacid dehalogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003776FC5 rbh
HAD-superfamily hydrolase rbh
HAD-superfamily hydrolase, subfamily IIA {ECO:0000313|EMBL:ADB41119.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24370..24534
DNA (165bp) protein (55aa)
haloacid dehalogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003776FC5
Haloacid dehalogenase {ECO:0000313|EMBL:AKD58161.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
HAD-superfamily hydrolase
SCNpilot_cont_500_bf_scaffold_2495_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24737..24976
DNA (240bp) protein (80aa)
acyl carrier protein n=1 Tax=Spirosoma RepID=UPI00036B57B9
acyl carrier protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2495_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25070..26320
DNA (1251bp) protein (417aa)
3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
3-oxoacyl-ACP synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI000374B68F rbh
Displaying items 1-30 of 42 in total

View Taxonomy