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SCNpilot_cont_500_bf_scaffold_2514

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2514_1
unknown

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2..256
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D7F60
SCNpilot_cont_500_bf_scaffold_2514_2
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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284..1150
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003747B36
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AFV06676.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
SCNpilot_cont_500_bf_scaffold_2514_trna_1
unknown

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comp(1306..1379)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2514_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1800..2186
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368EC46
YiaA/B two helix domain protein {ECO:0000313|EMBL:AKD58320.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
YiaAB two helix domain-containing protein
SCNpilot_cont_500_bf_scaffold_2514_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2603..5059)
DNA (2457bp) protein (819aa)
rcsC3; PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-) rbh
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B4CF7 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD56905.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_2514_5
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5365..6429
DNA (1065bp) protein (355aa)
putative UDP-glucose epimerase ytcB (EC:4.-.-.-)
Putative UDP-glucose epimerase ytcB {ECO:0000313|EMBL:CCG98824.1}; EC=4.-.-.- {ECO:0000313|EMBL:CCG98824.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F5716 rbh
SCNpilot_cont_500_bf_scaffold_2514_6
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6480..7067)
DNA (588bp) protein (196aa)
wcaF; putative colanic acid biosynthesis acetyltransferase WcaF (EC:2.3.1.-)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003718C9D rbh
Colanic acid biosynthesis acetyltransferase WcaF {ECO:0000313|EMBL:GAK88236.1}; TaxID=906888 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ulvanivorans.;"
SCNpilot_cont_500_bf_scaffold_2514_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7108..8658)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035DF2F8 rbh
Lipoprotein {ECO:0000313|EMBL:AKD55343.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2514_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8699..9961)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037899C5 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:AKD57252.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_2514_9
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10084..11280)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003804AF7 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:AKD03985.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
group 1 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_2514_10
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11422..12552)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370B857 rbh
Glycosyltransferase, GG-Bacteroidales peptide system {ECO:0000313|EMBL:KHJ39131.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SCNpilot_cont_500_bf_scaffold_2514_11
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12562..13194)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037278B3 rbh
Acyltransferase family protein {ECO:0000313|EMBL:EJL65384.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
transferase hexapeptide repeat containing protein
SCNpilot_cont_500_bf_scaffold_2514_12
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13425..13796)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CF27E
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:EJL65383.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
SCNpilot_cont_500_bf_scaffold_2514_13
unknown

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comp(13833..15200)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036FABF4 rbh
SCNpilot_cont_500_bf_scaffold_2514_14
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15151..16032)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037556B3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHJ39129.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SCNpilot_cont_500_bf_scaffold_2514_15
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16174..17529)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035DB9E2 rbh
O-antigen transporter {ECO:0000313|EMBL:AHM62212.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2514_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17792..19975)
DNA (2184bp) protein (728aa)
capsular exopolysaccharide family protein (EC:2.7.10.2) rbh
Capsular exopolysaccharide family {ECO:0000313|EMBL:ADB36789.1}; EC=2.7.10.2 {ECO:0000313|EMBL:ADB36789.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E9846 rbh
SCNpilot_cont_500_bf_scaffold_2514_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20015..20701)
DNA (687bp) protein (229aa)
putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase (EC:2.7.8.6)
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase {ECO:0000313|EMBL:CCG98810.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CCG98810.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CE02E rbh
Displaying 18 items

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