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SCNpilot_cont_500_bf_scaffold_2663

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2663_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..488)
DNA (486bp) protein (162aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000381D5F3
NADH dehydrogenase {ECO:0000313|EMBL:AKD57752.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_2663_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

710..2095
DNA (1386bp) protein (462aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B0E22 rbh
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB41698.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2663_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2218..3057
DNA (840bp) protein (280aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B0E22
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB41698.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2663_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3057..4028
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AEF17 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57753.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2663_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4120..5223)
DNA (1104bp) protein (368aa)
DAHP synthetase I/KDSA; K04516 chorismate mutase [EC:5.4.99.5] rbh
cytochrome C4 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003691576 rbh
DAHP synthetase I/KDSA {ECO:0000313|EMBL:ADB41696.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2663_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5474..6316
DNA (843bp) protein (281aa)
Proline dehydrogenase (EC:1.5.99.8) rbh
proline dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000361871B rbh
Proline dehydrogenase {ECO:0000313|EMBL:AKD57755.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_2663_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6288..6728
DNA (441bp) protein (147aa)
Proline dehydrogenase {ECO:0000313|EMBL:CCH56122.1}; EC=1.5.99.8 {ECO:0000313|EMBL:CCH56122.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8]
proline dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000361871B
SCNpilot_cont_500_bf_scaffold_2663_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6902..7726
DNA (825bp) protein (275aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] rbh
signal peptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FD6D5 rbh
SCNpilot_cont_500_bf_scaffold_2663_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7864..8748)
DNA (885bp) protein (295aa)
flagellar motor protein MotB n=1 Tax=Spirosoma panaciterrae RepID=UPI0003638F0E rbh
Membrane protein {ECO:0000313|EMBL:AKD57756.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB rbh
SCNpilot_cont_500_bf_scaffold_2663_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9014..10141
DNA (1128bp) protein (376aa)
6-phosphogluconolactonase (EC:3.1.1.31); K07404 6-phosphogluconolactonase [EC:3.1.1.31] rbh
6-phosphogluconolactonase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C638B rbh
3-carboxymuconate cyclase {ECO:0000313|EMBL:AKD57757.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_2663_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10222..10821
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003826B58 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41690.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2663_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10910..12007)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FD3C3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41685.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2663_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12080..12910
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E3D58 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41684.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2663_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13011..13694
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E57C3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92363.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_500_bf_scaffold_2663_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13785..14276)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037211DF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57764.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2663_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14336..15148)
DNA (813bp) protein (271aa)
LytTR family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CFE36 rbh
LytR family transcriptional regulator {ECO:0000313|EMBL:AKD55266.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Sensory transduction protein lytT rbh
SCNpilot_cont_500_bf_scaffold_2663_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15280..16317)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360DABB rbh
Sensor protein lytS rbh
Sensor protein lytS {ECO:0000313|EMBL:CCH02747.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_2663_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16314..17396)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000365DEF0 rbh
Sensor protein lytS {ECO:0000313|EMBL:CCH52069.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
signal transduction histidine kinase LytS
SCNpilot_cont_500_bf_scaffold_2663_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17685..18095
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003742CDB
nucleoporin, Nup153
Nucleoporin, Nup153 {ECO:0000313|EMBL:ADB41792.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_2663_20
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18267..19097
DNA (831bp) protein (277aa)
putative cytochrome c (EC:1.1.99.3) rbh
Putative cytochrome c {ECO:0000313|EMBL:CCH02655.1}; EC=1.1.99.3 {ECO:0000313|EMBL:CCH02655.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E51DA rbh
SCNpilot_cont_500_bf_scaffold_2663_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19320..20360
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003828DED rbh
Sensor protein lytS {ECO:0000313|EMBL:CCH52380.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Inner membrane protein yehU
SCNpilot_cont_500_bf_scaffold_2663_22
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20596..20988
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FCABB
PKD domain-containing protein
PKD domain-containing protein {ECO:0000313|EMBL:CCH01199.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_2663_23
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21050..21988
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FCABB rbh
PKD domain-containing protein rbh
PKD domain-containing protein {ECO:0000313|EMBL:CCH01199.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_2663_24
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22099..23442
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367D8C2 rbh
Sensor protein lytS rbh
Sensor protein lytS {ECO:0000313|EMBL:CCH02654.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Displaying 24 items

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