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SCNpilot_cont_500_bf_scaffold_9161

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9161_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(193..1146)
DNA (954bp) protein (318aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] rbh
serine/threonine dehydratase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036917B0 rbh
Serine dehydratase {ECO:0000313|EMBL:AKD56544.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_9161_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1389..2282
DNA (894bp) protein (298aa)
fatty acid hydroxylase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003773B46 rbh
C-5 sterol desaturase {ECO:0000313|EMBL:AKD58587.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
fatty acid hydroxylase rbh
SCNpilot_cont_500_bf_scaffold_9161_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2380..3006)
DNA (627bp) protein (209aa)
transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000373B8D3
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADB37343.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_9161_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3082..3702)
DNA (621bp) protein (207aa)
transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000373B8D3
Transporter {ECO:0000313|EMBL:AKD56296.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
outer membrane efflux protein
SCNpilot_cont_500_bf_scaffold_9161_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3923..4624
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000366F111 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB37341.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_9161_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4621..5301
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003667D80 rbh
Ion transporter {ECO:0000313|EMBL:AKD56299.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ion transport 2 domain protein
SCNpilot_cont_500_bf_scaffold_9161_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5317..5793)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BBBD8 rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:AKD58588.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
polysaccharide deacetylase
SCNpilot_cont_500_bf_scaffold_9161_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5769..6203)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BBBD8
Polysaccharide deacetylase {ECO:0000313|EMBL:AKD58588.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_9161_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6203..6502)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003770E0A
Acetyltransferase {ECO:0000313|EMBL:AKD56300.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
acetyltransferase-like protein; K06975
SCNpilot_cont_500_bf_scaffold_9161_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6677..7636
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000369ECEF rbh
hypothetical protein rbh
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:ADB37339.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_9161_11
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7915..8337
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000378FB7B
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AFK05566.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_500_bf_scaffold_9161_12
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8456..8803
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A4443
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
SCNpilot_cont_500_bf_scaffold_9161_13
unknown

Not on your lists

comp(8836..9225)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F9CD6
SCNpilot_cont_500_bf_scaffold_9161_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9230..10651)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D38D4 rbh
phosphoesterase PA-phosphatase-like protein rbh
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEE51314.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_500_bf_scaffold_9161_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10995..11474)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C0E93
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40645.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_9161_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11713..12570)
DNA (858bp) protein (286aa)
acyl-CoA dehydrogenase domain-containing protein; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] rbh
acyl-CoA dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003634A0C rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKD56533.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_9161_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12992..13540
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000363913C rbh
Shikimate kinase {ECO:0000313|EMBL:EHQ28491.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9161_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13570..15282
DNA (1713bp) protein (571aa)
GMC family oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036929AC rbh
choline dehydrogenase rbh
Choline dehydrogenase {ECO:0000313|EMBL:ADB37076.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_9161_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15372..16067)
DNA (696bp) protein (232aa)
glycoside hydrolase family protein; K15532 unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
glucuronyl hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036289FA
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:ADB37075.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying 19 items

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