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SCNpilot_cont_500_bf_scaffold_1619

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1619_1
unknown

Not on your lists

comp(239..430)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1619_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1430..2224
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003795E4D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49994.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_500_bf_scaffold_1619_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2303..3580
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370C301 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ34141.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1619_4
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4301..5869
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003795811 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHJ97026.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PKD domain-containing protein
SCNpilot_cont_500_bf_scaffold_1619_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6099..6503
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EB735
Uncharacterized protein {ECO:0000313|EMBL:AKD53804.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1619_6
unknown

Not on your lists

comp(6693..7589)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B0BE6 rbh
SCNpilot_cont_500_bf_scaffold_1619_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8485..9036)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E5F3A rbh
WGS project CAIT00000000 data, contig 7 {ECO:0000313|EMBL:CCH54868.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
SCNpilot_cont_500_bf_scaffold_1619_8
unknown

Not on your lists

9229..9435
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1619_9
unknown

Not on your lists

9925..10212
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F457D
SCNpilot_cont_500_bf_scaffold_1619_10
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10600..12954)
DNA (2355bp) protein (785aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21P31_SACD2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD79548.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
SCNpilot_cont_500_bf_scaffold_1619_11
Pseudomonas sp. GM16, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12945..14000)
DNA (1056bp) protein (352aa)
Flavin-dependent dehydrogenase n=2 Tax=Pseudomonas RepID=J3DN19_9PSED
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:EJL95371.1}; TaxID=1144322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM16.;"
FAD dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_1619_12
unknown

Not on your lists

14387..14620
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1619_13
unknown

Not on your lists

comp(14872..14982)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1619_14
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15452..15574)
DNA (123bp) protein (41aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035ED81A
hypothetical protein
Tax=CG_Flavo_01
SCNpilot_cont_500_bf_scaffold_1619_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16085..17560
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000377C0CC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41287.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_1619_16
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17590..17982)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A5AB2
DNA/RNA non-specific endonuclease
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:CCH02003.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_500_bf_scaffold_1619_trna_1
unknown

Not on your lists

comp(18201..18274)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1619_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18328..19125)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] rbh
enoyl-CoA hydratase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003778D1E rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKD54593.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_1619_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19178..19891)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372B807 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB36693.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_1619_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19922..21370)
DNA (1449bp) protein (483aa)
RNA polymerase sigma54 factor n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E5307 rbh
RNA polymerase sigma54 factor {ECO:0000313|EMBL:AKD54595.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor rbh
SCNpilot_cont_500_bf_scaffold_1619_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21502..22473
DNA (972bp) protein (324aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] rbh
nicotinate phosphoribosyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A2701 rbh
Displaying 21 items

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