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SCNpilot_cont_500_bf_scaffold_3034

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3034_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..974)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C92CE rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57565.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3034_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1046..2056)
DNA (1011bp) protein (337aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CFA0B rbh
prolipoprotein diacylglyceryl transferase
SCNpilot_cont_500_bf_scaffold_3034_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2662..3567)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B244A rbh
Abortive infection protein {ECO:0000313|EMBL:CCH52155.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein; K07052
SCNpilot_cont_500_bf_scaffold_3034_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3719..4462)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036ECA1A rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57564.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3034_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4477..5157)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036661F0 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB40496.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3034_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5434..5613
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367F463
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40439.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3034_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5658..6125
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003654949
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97322.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3034_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6157..6924)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000371AEDC rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57508.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3034_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7093..10542
DNA (3450bp) protein (1150aa)
pyruvate carboxylase; K01958 pyruvate carboxylase [EC:6.4.1.1] rbh
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
pyruvate carboxylase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003721BD8 rbh
SCNpilot_cont_500_bf_scaffold_3034_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10878..11207
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381444A
Uncharacterized protein {ECO:0000313|EMBL:CCH56820.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3034_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


11372..11803
DNA (432bp) protein (144aa)
30S ribosomal protein S12 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C3062
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3034_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


11943..12410
DNA (468bp) protein (156aa)
30S ribosomal protein S7 n=1 Tax=Spirosoma panaciterrae RepID=UPI000371E561 rbh
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3034_13
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12473..13366
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E2A77 rbh
Aldose epimerase {ECO:0000313|EMBL:AKD57500.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
aldose 1-epimerase rbh
SCNpilot_cont_500_bf_scaffold_3034_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13436..14068)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EFFE5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40426.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3034_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14058..14960)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EFFE5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB40426.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3034_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15236..15907)
DNA (672bp) protein (224aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372BF01 rbh
outer membrane chaperone Skp; K06142 outer membrane protein rbh
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:ADB40417.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3034_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15931..16506)
DNA (576bp) protein (192aa)
outer membrane chaperone Skp n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CF365 rbh
Outer membrane chaperone Skp {ECO:0000313|EMBL:AKD57498.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
outer membrane chaperone Skp; K06142 outer membrane protein rbh
SCNpilot_cont_500_bf_scaffold_3034_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16646..16942)
DNA (297bp) protein (99aa)
outer membrane protein assembly complex, YaeT protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F9F67
outer membrane protein assembly complex, YaeT protein; K07277 outer membrane protein
Outer membrane protein assembly complex, YaeT protein {ECO:0000313|EMBL:ADB40415.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying 18 items

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