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SCNpilot_cont_500_bf_scaffold_3165

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3165_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..1402
DNA (1401bp) protein (467aa)
alkyl hydroperoxide reductase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037510E9 rbh
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AKD58285.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen rbh
SCNpilot_cont_500_bf_scaffold_3165_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1499..2410)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038102AF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB40262.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3165_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2608..3042)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BCAA2
RlpA-like protein {ECO:0000313|EMBL:AKD53931.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
lipoprotein A; K03642 rare lipoprotein A
SCNpilot_cont_500_bf_scaffold_3165_4
unknown

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3080..3286
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3165_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3317..3643
DNA (327bp) protein (109aa)
DNA-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CFD35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40264.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3165_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3907..5007
DNA (1101bp) protein (367aa)
GTP-binding protein YchF n=1 Tax=Spirosoma panaciterrae RepID=UPI00036DB10C rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
GTP-binding protein YchF; K06942 rbh
SCNpilot_cont_500_bf_scaffold_3165_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5077..6438)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037481CB rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD53928.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3165_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6510..7454
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000369E759 rbh
hypothetical protein; K08994 putative membrane protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB40267.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3165_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7473..8531)
DNA (1059bp) protein (353aa)
radical SAM protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381A82E rbh
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ADB40268.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3165_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8676..10622)
DNA (1947bp) protein (649aa)
ABC transporter ATP-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036914E6 rbh
ABC transporter related protein {ECO:0000313|EMBL:CCH55886.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3 rbh
SCNpilot_cont_500_bf_scaffold_3165_trna_1
unknown

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10698..10770
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_3165_11
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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comp(11228..11959)
DNA (732bp) protein (244aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002FE2C56
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCNpilot_cont_500_bf_scaffold_3165_12
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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comp(11992..12627)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446D5
Putative homoserine kinase type II (protein kinase fold)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCNpilot_cont_500_bf_scaffold_3165_13
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(12676..13086)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D3840E
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCNpilot_cont_500_bf_scaffold_3165_14
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13088..13540)
DNA (453bp) protein (151aa)
Putative sodium-dependent transporter yocS n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K1X2_9BACT
putative sodium-dependent transporter yocS
Putative sodium-dependent transporter yocS {ECO:0000313|EMBL:CCG98125.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Displaying 15 items

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