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SCNpilot_cont_500_bf_scaffold_3284

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3284_1
unknown

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comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3284_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(110..727)
DNA (618bp) protein (206aa)
cupin; K14977 ureidoglycine aminohydrolase [EC:3.5.3.-] rbh
cupin n=1 Tax=Spirosoma panaciterrae RepID=UPI00036695C3 rbh
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEV96837.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3284_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(912..2123)
DNA (1212bp) protein (404aa)
amidase; K02083 allantoate deiminase [EC:3.5.3.9] rbh
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003626EC9 rbh
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EHQ30460.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_500_bf_scaffold_3284_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2166..2987)
DNA (822bp) protein (274aa)
allantoinase; K01466 allantoinase [EC:3.5.2.5] rbh
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036021A1 rbh
Allantoinase {ECO:0000313|EMBL:EHQ30461.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_500_bf_scaffold_3284_5
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3028..3399)
DNA (372bp) protein (124aa)
allantoinase; K01466 allantoinase [EC:3.5.2.5]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036021A1
Allantoinase {ECO:0000313|EMBL:AHJ98252.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
SCNpilot_cont_500_bf_scaffold_3284_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3568..4413
DNA (846bp) protein (282aa)
urate oxidase; K00365 urate oxidase [EC:1.7.3.3] rbh
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003731573 rbh
SCNpilot_cont_500_bf_scaffold_3284_7
unknown

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comp(4499..4900)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360CB87
SCNpilot_cont_500_bf_scaffold_3284_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5154..5690)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E66BE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38236.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3284_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5821..6261
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037139F2
Nuclease {ECO:0000313|EMBL:AKD55585.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
nuclease A inhibitor
SCNpilot_cont_500_bf_scaffold_3284_10
R_RIF_OD1_10_39_26, RIF-OD1-1, Parcubacteria, Bacteria

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6354..8654
DNA (2301bp) protein (767aa)
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_10_39_26_curated
SCNpilot_cont_500_bf_scaffold_3284_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(8696..9040)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003686CC3
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3284_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(9193..9387)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Spirosoma panaciterrae RepID=UPI000382D85E
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3284_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9529..10083)
DNA (555bp) protein (185aa)
translation initiation factor IF-3 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003729021 rbh
translation initiation factor IF-3; K02520 translation initiation factor IF-3 rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3284_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10287..12230)
DNA (1944bp) protein (648aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
threonyl-tRNA synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003670C42 rbh
SCNpilot_cont_500_bf_scaffold_3284_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12375..13682)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E66B6 rbh
hypothetical protein rbh
TPR repeat-containing protein {ECO:0000313|EMBL:ADB38242.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3284_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13679..13906)
DNA (228bp) protein (76aa)
SAM dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI000362B024
Oxidoreductase {ECO:0000313|EMBL:AKD58493.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Displaying 16 items

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