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SCNpilot_cont_500_bf_scaffold_3819

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3819_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..439
DNA (438bp) protein (146aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
glycerol kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI000360DC24
SCNpilot_cont_500_bf_scaffold_3819_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(505..912)
DNA (408bp) protein (136aa)
stress responsive protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C89C8
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:ADB40747.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3819_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1074..2294)
DNA (1221bp) protein (407aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
isocitrate dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000364DBDA rbh
SCNpilot_cont_500_bf_scaffold_3819_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2473..3663
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQG2_SPILD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB40743.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3819_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3722..4969)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003679440 rbh
N-acyl-D-glucosamine 2-epimerase-like protein rbh
N-acyl-D-glucosamine 2-epimerase-like protein {ECO:0000313|EMBL:ADB41879.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3819_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5066..7522)
DNA (2457bp) protein (819aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
Lon protease n=1 Tax=Spirosoma panaciterrae RepID=UPI000382D6A8 rbh
SCNpilot_cont_500_bf_scaffold_3819_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7724..8131)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000378FFA8
Uncharacterized protein {ECO:0000313|EMBL:AKD58751.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3819_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8280..9500)
DNA (1221bp) protein (407aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] rbh
peptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036DE73B rbh
SCNpilot_cont_500_bf_scaffold_3819_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9716..10888)
DNA (1173bp) protein (391aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spiros
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CAB13 rbh
SCNpilot_cont_500_bf_scaffold_3819_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10885..11475)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036398ED
Uncharacterized protein {ECO:0000313|EMBL:AKD57384.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3819_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11481..12821)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003719910 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57383.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3819_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12835..13380)
DNA (546bp) protein (182aa)
gh3 auxin-responsive promoter n=1 Tax=Spirosoma panaciterrae RepID=UPI000375F999
GH3 auxin-responsive promoter
Uncharacterized protein {ECO:0000313|EMBL:AKD57382.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_3819_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15275..16300
DNA (1026bp) protein (342aa)
cell shape-determining protein MreB n=1 Tax=Spirosoma panaciterrae RepID=UPI000377CC14 rbh
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins rbh
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ADB41887.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3819_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16385..17221
DNA (837bp) protein (279aa)
rod shape-determining protein MreC n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D830B rbh
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC rbh
Rod shape-determining protein MreC {ECO:0000313|EMBL:ADB41888.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3819_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17295..17801
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A7B4D rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57379.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3819_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17842..18333
DNA (492bp) protein (164aa)
diguanylate cyclase n=1 Tax=Spirosoma panaciterrae RepID=UPI000378B7E8
GAF domain-containing protein {ECO:0000313|EMBL:CCH56758.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
GAF domain-containing protein; K07170 GAF domain-containing protein
SCNpilot_cont_500_bf_scaffold_3819_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18497..18949
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003823535
Uncharacterized protein {ECO:0000313|EMBL:AKD57377.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3819_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19078..20148
DNA (1071bp) protein (357aa)
peptidylglycine monooxygenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036213CF rbh
NHL repeat containing protein rbh
NHL repeat containing protein {ECO:0000313|EMBL:ADB41892.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3819_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20162..20563
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000382BAAC
ribonuclease inhibitor
Leucine-rich repeat, ribonuclease inhibitor subtype {ECO:0000313|EMBL:ADB41893.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3819_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20694..21581
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000382BAAC rbh
Leucine-rich repeat, ribonuclease inhibitor subtype {ECO:0000313|EMBL:AKD57375.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ribonuclease inhibitor rbh
Displaying 20 items

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