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SCNpilot_cont_500_bf_scaffold_3624_20

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: 25070..25585

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Spirosoma panaciterrae RepID=UPI00036542FD similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 171.0
  • Bit_score: 346
  • Evalue 1.20e-92
  • rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:AKD57342.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 171.0
  • Bit_score: 342
  • Evalue 4.30e-91
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 171.0
  • Bit_score: 341
  • Evalue 1.60e-91
  • rbh

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGACAGCTCTCGAATTTACTAACCATATTGGCAAAGTGTCTAAGTCTTTACGCCCATTTGCGTTGCGTTTAACAAAAGATGTTGAAGATGCAAACGATCTGTTGCAAGACACCCTGCTGAAAGCGTTTACCAATCGTGATAAATATACGGATGGTACCAATCTGAAAGCTTGGTTGTATACGATCATGAAAAACACATTCATTACAAACTATCAGCGCATGGTTCGTAAGAACACGTTTATTGATACAACTGACAACCTGCATTATATCAATTCCATGGAGAGCAGCACCGATAACCTGGCCTACTCGTCGTTTGCGCAGGATGATATCAATCGGGCAGTCAACGGACTTGATGATACATATAAAACCCCATTTATGATGCATTTCCGTGGATTTAAATACCACGAGATTGCAGCTAAACTCAATATTCCTATTGGTACGGTAAAAAACCGGATTCATATTGCCCGGAAAGAATTGAAAGATCAGCTAAAAGTTTACGCATATTTTAATTCGTAA
PROTEIN sequence
Length: 172
MTALEFTNHIGKVSKSLRPFALRLTKDVEDANDLLQDTLLKAFTNRDKYTDGTNLKAWLYTIMKNTFITNYQRMVRKNTFIDTTDNLHYINSMESSTDNLAYSSFAQDDINRAVNGLDDTYKTPFMMHFRGFKYHEIAAKLNIPIGTVKNRIHIARKELKDQLKVYAYFNS*