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SCNpilot_cont_500_bf_scaffold_3624

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3624_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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81..383
DNA (303bp) protein (101aa)
DNA-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003618EBC
DNA-binding protein {ECO:0000313|EMBL:AKD57329.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_cont_500_bf_scaffold_3624_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

451..1305
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036AAF36 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41943.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1738..3300
DNA (1563bp) protein (521aa)
Rne/Rng family ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] rbh
ribonuclease G n=1 Tax=Spirosoma panaciterrae RepID=UPI00037502EA rbh
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ADB41941.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3401..4513)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375771F rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD57331.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3624_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4920..5864
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036369B5 rbh
Histidine kinase {ECO:0000313|EMBL:AKD57332.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
response regulator receiver protein rbh
SCNpilot_cont_500_bf_scaffold_3624_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7201..7896)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368DC8F rbh
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB41937.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8133..8609
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360C296
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41936.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8687..9775)
DNA (1089bp) protein (363aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
DNA primase n=1 Tax=Spirosoma panaciterrae RepID=UPI000360F210 rbh
SCNpilot_cont_500_bf_scaffold_3624_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10853..12118
DNA (1266bp) protein (422aa)
phosphoesterase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A6CFB rbh
Phosphoesterase {ECO:0000313|EMBL:AKD58748.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3624_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12318..14210)
DNA (1893bp) protein (631aa)
Amidophosphoribosyltransferase {ECO:0000313|EMBL:ADB41933.1}; EC=2.4.2.14 {ECO:0000313|EMBL:ADB41933.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] rbh
amidophosphoribosyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036ED6CD rbh
SCNpilot_cont_500_bf_scaffold_3624_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14478..14882)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036ABF36
PA-phosphatase {ECO:0000313|EMBL:AKD57336.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
PA-phosphatase-like phosphoesterase
SCNpilot_cont_500_bf_scaffold_3624_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14952..15395)
DNA (444bp) protein (148aa)
gliding motility-associated lipoprotein GldH n=1 Tax=Spirosoma panaciterrae RepID=UPI00037225E0 rbh
Gliding motility protein GldH {ECO:0000313|EMBL:AKD58749.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
gliding motility-associated lipoprotein GldH
SCNpilot_cont_500_bf_scaffold_3624_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15542..15901
DNA (360bp) protein (120aa)
transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI000366032C
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ADB41930.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15998..17878
DNA (1881bp) protein (627aa)
Peptidase M56 BlaR1 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QSZ7_SPILD rbh
peptidase M56 BlaR1 rbh
Peptidase M56 BlaR1 {ECO:0000313|EMBL:ADB41929.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17887..18834
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E6AB7 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB41928.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18889..20079)
DNA (1191bp) protein (397aa)
PSP1 domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QSZ5_SPILD rbh
PSP1 domain-containing protein rbh
PSP1 domain protein {ECO:0000313|EMBL:ADB41927.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_3624_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20173..21459)
DNA (1287bp) protein (429aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
phosphoribosylamine--glycine ligase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AA834 rbh
SCNpilot_cont_500_bf_scaffold_3624_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21566..23719)
DNA (2154bp) protein (718aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] rbh
ATP-dependent DNA helicase RecQ n=1 Tax=Spirosoma panaciterrae RepID=UPI0003708296 rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AKD57340.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_3624_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23827..24795
DNA (969bp) protein (323aa)
KpsF/GutQ family protein (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] rbh
KpsF/GutQ family protein {ECO:0000313|EMBL:ADB41924.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ADB41924.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003683019 rbh
SCNpilot_cont_500_bf_scaffold_3624_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25070..25585
DNA (516bp) protein (172aa)
RNA polymerase sigma factor n=1 Tax=Spirosoma panaciterrae RepID=UPI00036542FD rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:AKD57342.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_500_bf_scaffold_3624_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25915..26400
DNA (486bp) protein (162aa)
phytoene desaturase; K10027 phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
phytoene dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003632D5E
Phytoene desaturase {ECO:0000313|EMBL:ADB41922.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying 21 items

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