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SCNpilot_cont_500_bf_scaffold_5440_7

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: 6526..7113

Top 3 Functional Annotations

Value Algorithm Source
inner-membrane translocator (EC:3.6.3.17); K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 176.0
  • Bit_score: 293
  • Evalue 4.50e-77
Inner-membrane translocator {ECO:0000313|EMBL:ACU05003.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ACU05003.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 176.0
  • Bit_score: 293
  • Evalue 2.00e-76
ribose ABC transporter permease n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E3FAC similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 183.0
  • Bit_score: 357
  • Evalue 8.00e-96
  • rbh

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGCACCTAACCGCAACTACCTATCGACCTTTCCTAACGCGATTTCAATCGCTGATTGCGCTGTTCATTCTCTGCCTGGGGATCAGTCTGCTATCGGATAAGTTTCTGACTGTGGCCAATTTCTGGAATGTGCTCCGGCAGATTTCCGTCAATGTATGCATCTCAACGGGTATGACGCTGGTGGTGCTGACAGCCGGTATTGACCTGTCGGTAGGTTCCGTTTTGGCTCTGTCGGGGGCGATTACGGCTGGCCTTCTGCGCAACGGTATTCCTATTCCGTCGGCCAATTTATACATTGGTTTTACCTTATTGGGAGCAATGCTGGCTGGTATCCTGACGGGTTCGGCGCTGGGTTGGTTCAATGGCTGGGCTATTACACGCTTTAAATTGCCGCCCTTTGTGGCCACACTGGCGATGCTGACCATTGCCCGTGGCCTGACGATGCTCTGGACGGAAGGGTTTCCAATCACAGGACTCGGCGACTCGTTTACCTTCCTGGGAACGGGCTGGTTTTTAGGCATCCCGGTTCCGGTCTGGTTATCGGGCCTTAACCCGGTTGGGTCGCTACATCTATGCCATCGGTGGTAG
PROTEIN sequence
Length: 196
MHLTATTYRPFLTRFQSLIALFILCLGISLLSDKFLTVANFWNVLRQISVNVCISTGMTLVVLTAGIDLSVGSVLALSGAITAGLLRNGIPIPSANLYIGFTLLGAMLAGILTGSALGWFNGWAITRFKLPPFVATLAMLTIARGLTMLWTEGFPITGLGDSFTFLGTGWFLGIPVPVWLSGLNPVGSLHLCHRW*