ggKbase home page

SCNpilot_cont_500_bf_scaffold_6783_8

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: comp(5433..6062)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transportern ExbD n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F8BBD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 416
  • Evalue 1.60e-113
  • rbh
Biopolymer transporter ExbD {ECO:0000313|EMBL:AKD58201.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 208.0
  • Bit_score: 368
  • Evalue 6.80e-99
biopolymertransporter ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 208.0
  • Bit_score: 364
  • Evalue 2.90e-98
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 630
ATGCCAGCAGTAAAAATTAAACGTGCCAGTTCGACGGTCGACATGACCGCGATGTGCGACGTGGCGTTCCTGTTGTTGACGTTCTTTATTCTGACCGCCCAGTTCCGGGCGCAGGATGCCGCAGCAATCGAAACCCCCTCGTCTATCTCTGGCATTAAAGTCCCGGATAAGGACATTATGACCATTGGTCTTGGCAGAGACGGTAAAGTCTACTTTGGTATTGATAACCAGCAGCACCGATTGGCTATGCTGGATAACATTGCCCAGGCAAAAGGCATTACCTTTTCGCCCAAAGAGCAGAAAGAGTTCGCCCTCATGTCGAACTTCGGTATGCCAATCGCCCAGTTAAAGCAGTTCCTTAACCTGTCGCATGAGCAGCAGGGGAAAATCAAACAACCCGGTATTCCTACCGATTCGACAGGAGCCGGTGCTACGAACGAGCTGAAAGACTGGGTATTTAACGCCCGTAAGGCTAACAACGATCTCCGAATTGCGTTGAAAGGTGATAATCTTGCCAAATTCCCGGAATTCAAGAACGTGTTAGCTACGCTGCAAGCACAAAACATCAACAAATTCAACCTGATCACCGGTACGGAAGCACCACCGGCAGGCTGGAAAGCGGATGACTAA
PROTEIN sequence
Length: 210
MPAVKIKRASSTVDMTAMCDVAFLLLTFFILTAQFRAQDAAAIETPSSISGIKVPDKDIMTIGLGRDGKVYFGIDNQQHRLAMLDNIAQAKGITFSPKEQKEFALMSNFGMPIAQLKQFLNLSHEQQGKIKQPGIPTDSTGAGATNELKDWVFNARKANNDLRIALKGDNLAKFPEFKNVLATLQAQNINKFNLITGTEAPPAGWKADD*