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SCNpilot_cont_500_bf_scaffold_6783

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6783_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..293)
DNA (291bp) protein (97aa)
GTPase CgtA n=1 Tax=Spirosoma panaciterrae RepID=UPI00036048D3
GTP-binding protein Obg/CgtA; K03979 GTP-binding protein
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_6783_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(302..883)
DNA (582bp) protein (194aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] rbh
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiroso
adenylate kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI000378C7CE rbh
SCNpilot_cont_500_bf_scaffold_6783_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1055..2830)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000379779B rbh
hypothetical protein rbh
TPR repeat-containing protein {ECO:0000313|EMBL:ADB41068.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_6783_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2920..3894)
DNA (975bp) protein (325aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CA77E rbh
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein rbh
ABC-type phosphate transport system periplasmic component-like protein {ECO:0000313|EMBL:ADB41067.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_6783_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3842..4063)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QD60_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41066.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_6783_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4105..4836)
DNA (732bp) protein (244aa)
biopolymer transporter TonB n=1 Tax=Spirosoma panaciterrae RepID=UPI000360766C rbh
Energy transducer TonB {ECO:0000313|EMBL:AKD58199.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB family protein; K03832 periplasmic protein TonB rbh
SCNpilot_cont_500_bf_scaffold_6783_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4841..5377)
DNA (537bp) protein (179aa)
biopolymer transportern ExbD n=1 Tax=Spirosoma panaciterrae RepID=UPI000361C001 rbh
Biopolymer transporter ExbD {ECO:0000313|EMBL:AKD58200.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
biopolymertransporter ExbD/TolR rbh
SCNpilot_cont_500_bf_scaffold_6783_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5433..6062)
DNA (630bp) protein (210aa)
biopolymer transportern ExbD n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F8BBD rbh
Biopolymer transporter ExbD {ECO:0000313|EMBL:AKD58201.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
biopolymertransporter ExbD/TolR rbh
SCNpilot_cont_500_bf_scaffold_6783_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6135..6971)
DNA (837bp) protein (279aa)
flagellar motor protein MotA n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CF35C rbh
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CCH56894.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB rbh
SCNpilot_cont_500_bf_scaffold_6783_10
unknown

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comp(7510..7959)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003821445
SCNpilot_cont_500_bf_scaffold_6783_11
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8089..8865)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003735545 rbh
Membrane protein {ECO:0000313|EMBL:EZH73280.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6783_12
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9039..9623)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036007D8 rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EZH73368.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
putative Crp/Fnr family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6783_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9707..10228)
DNA (522bp) protein (174aa)
Rhodanese domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPL6_SPILD
rhodanese
Rhodanese domain protein {ECO:0000313|EMBL:ADB40675.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_500_bf_scaffold_6783_trna_1
unknown

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comp(10360..10433)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_6783_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10531..11403)
DNA (873bp) protein (291aa)
aminopeptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CDC82
Aminopeptidase {ECO:0000313|EMBL:AKD58226.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
aminopeptidase
Displaying 15 items

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