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SCNpilot_cont_500_bf_scaffold_7829

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7829_1
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..469
DNA (468bp) protein (156aa)
Type 11 methyltransferase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LE50_9RHIZ
SAM-dependent methyltransferase {ECO:0000313|EMBL:KFF86423.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
SAM-dependent methyltransferase
SCNpilot_cont_500_bf_scaffold_7829_2
unknown

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comp(488..997)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7829_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(994..1230)
DNA (237bp) protein (79aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHE6_PHEZH
2-nitropropane dioxygenase-like protein {ECO:0000313|EMBL:ACG77406.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_500_bf_scaffold_7829_4
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1278..2021)
DNA (744bp) protein (248aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase, NPD n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JAF0_BURVG
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABO53253.1}; Flags: Precursor;; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
SCNpilot_cont_500_bf_scaffold_7829_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2133..3116
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000368E8B8
putative metal-dependent hydrolase with the TIM-barrel fold
Tax=RBG_16_Deltaproteobacteria_54_11_curated
SCNpilot_cont_500_bf_scaffold_7829_6
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3286..4152
DNA (867bp) protein (289aa)
Transposase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WU68_9BRAD rbh
Transposase {ECO:0000313|EMBL:EJN16270.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
transposase of ISMex17, IS110 family rbh
SCNpilot_cont_500_bf_scaffold_7829_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4470..4994)
DNA (525bp) protein (175aa)
thioesterase superfamily protein
thioesterase superfamily protein id=12550089 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_500_bf_scaffold_7829_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5084..5884
DNA (801bp) protein (267aa)
Methyltransferase type 11 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG44_9RHIZ
Methyltransferase type 11 {ECO:0000313|EMBL:KGM31782.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
type 11 methyltransferase
SCNpilot_cont_500_bf_scaffold_7829_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6111..6425
DNA (315bp) protein (105aa)
molecular chaperone GroES n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314F3CB
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
groES; co-chaperonin GroES; K04078 chaperonin GroES
SCNpilot_cont_500_bf_scaffold_7829_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6463..8106
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=CH60_PARL1 rbh
chaperonin GroEL; K04077 chaperonin GroEL rbh
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_7829_11
unknown

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8495..8950
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7829_12
unknown

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comp(8910..9824)
DNA (915bp) protein (305aa)
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7829_13
unknown

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10790..11386
DNA (597bp) protein (199aa)

This feature has no annotations

Displaying 13 items

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