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SCNpilot_cont_500_bf_scaffold_2247

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2247_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..977
DNA (975bp) protein (325aa)
Conjugal transfer protein TrbG n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4L0_9RHIZ
conjugal transfer protein TrbG
Conjugal transfer protein TrbG {ECO:0000313|EMBL:AGK57162.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_2247_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

982..2046
DNA (1065bp) protein (355aa)
Conjugation TrbI family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V518_9BRAD
Conjugation TrbI family protein {ECO:0000313|EMBL:EFI53048.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
conjugal transfer protein TrbI
SCNpilot_cont_500_bf_scaffold_2247_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2058..2315
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:ETR77818.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2247_4
bacterium YEK0313, Bacteria

Not on your lists

comp(2288..3271)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037D7E22
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:CEJ16015.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2247_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3365..4444)
DNA (1080bp) protein (360aa)
Arsenite efflux pump ACR3 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2F5_9PROT
Arsenical resistance protein {ECO:0000313|EMBL:GAN79036.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
arsenite efflux pump ACR3; K03325 arsenite transporter, ACR3 family
SCNpilot_cont_500_bf_scaffold_2247_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4441..4884)
DNA (444bp) protein (148aa)
arsenate reductase n=1 Tax=Amorphus coralli RepID=UPI0003778827
Arsenate reductase {ECO:0000313|EMBL:GAO22447.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
arsE; arsenate reductase
SCNpilot_cont_500_bf_scaffold_2247_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4881..5405)
DNA (525bp) protein (175aa)
arsenate reductase (EC:1.20.4.1)
Arsenate reductase {ECO:0000313|EMBL:BAJ83094.1}; EC=1.20.4.1 {ECO:0000313|EMBL:BAJ83094.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Arsenate reductase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7M7_ACIMA
SCNpilot_cont_500_bf_scaffold_2247_8
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(5402..5905)
DNA (504bp) protein (168aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QNC6_METSZ
Glyoxalase {ECO:0000313|EMBL:KIY09834.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_500_bf_scaffold_2247_9
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5902..6756)
DNA (855bp) protein (285aa)
Regulatory protein, ArsR n=1 Tax=Acidiphilium sp. PM RepID=F7SAG0_9PROT
Regulatory protein, ArsR {ECO:0000313|EMBL:EGO93780.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2247_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6760..7479)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037E5FDD
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
phoU2; transcriptional repressor for high-affinity phosphate uptake
SCNpilot_cont_500_bf_scaffold_2247_11
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7528..8334)
DNA (807bp) protein (269aa)
pstB; phosphate transporter ATP-binding protein (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Frankia sp. QA3 RepID=I9KM30_9ACTO
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
SCNpilot_cont_500_bf_scaffold_2247_12
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8327..9181)
DNA (855bp) protein (285aa)
Phosphate ABC transporter membrane protein 2, PhoT family id=1716406 bin=GWA2_Elusimicrobia_69_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
phosphate ABC transporter permease; K02038 phosphate transport system permease protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_cont_500_bf_scaffold_2247_13
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9184..10236)
DNA (1053bp) protein (351aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZV18_MELRP
phosphate ABC transporter, inner membrane subunit PstC
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_cont_500_bf_scaffold_2247_14
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10301..11383)
DNA (1083bp) protein (361aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037804C1
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_cont_500_bf_scaffold_2247_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11738..12637)
DNA (900bp) protein (300aa)
Protein tyrosine phosphatase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMD9_XANP2 rbh
protein tyrosine phosphatase rbh
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABS69182.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_2247_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12849..13385
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhizobium radiobacter RepID=K7X7I1_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:AFX65588.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative transcriptional regulator (modular protein)
SCNpilot_cont_500_bf_scaffold_2247_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13549..13782
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBR5_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69731.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_2247_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13801..15474
DNA (1674bp) protein (558aa)
Resolvase domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ98_XANP2
Putative resolvase domain-containing protein {ECO:0000313|EMBL:KGJ64288.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
resolvase domain-containing protein
SCNpilot_cont_500_bf_scaffold_2247_trna_1
unknown

Not on your lists

comp(15436..15507)
DNA (72bp)
transferRNA
Displaying 19 items

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