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SCNpilot_cont_500_bf_scaffold_2846

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2846_trna_1
unknown

Not on your lists

2..76
DNA (75bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2846_1
unknown

Not on your lists

298..639
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_2
unknown

Not on your lists

842..1534
DNA (693bp) protein (231aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_3
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1629..1976)
DNA (348bp) protein (116aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GN46_RUEST
nucleic acid binding, OB-fold, tRNA/helicase-type
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ABF61920.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain TM1040) (Silicibacter sp.).;"
SCNpilot_cont_500_bf_scaffold_2846_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1999..2292)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VKX2_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJP77038.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_500_bf_scaffold_2846_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2397..3044
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WNM0_BURSC
Uncharacterized protein {ECO:0000313|EMBL:KGI77826.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2846_6
unknown

Not on your lists

3709..4218
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_7
unknown

Not on your lists

4372..4659
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_8
Sinorhizobium phage phiLM21, Caudovirales, Viruses

Not on your lists

4693..5043
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KTI2_METC4
Excisionase {ECO:0000313|EMBL:AII27754.1}; TaxID=1524882 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Sinorhizobium phage phiLM21.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2846_9
unknown

Not on your lists

comp(5153..5623)
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_10
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5730..7625)
DNA (1896bp) protein (632aa)
RecA-family ATPase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUP0_9BRAD
RecA-family ATPase {ECO:0000313|EMBL:EIG63496.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2846_11
unknown

Not on your lists

comp(7751..8338)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_12
unknown

Not on your lists

comp(8319..8477)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_13
Phage phiJL001, Yualikevirus, Caudovirales, Viruses

Not on your lists

comp(8487..10658)
DNA (2172bp) protein (724aa)
Gp88 n=1 Tax=Phage phiJL001 RepID=Q5DN17_9CAUD
Gp88 {ECO:0000313|EMBL:AAT69481.1}; TaxID=279383 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Yualikevirus.;" source="Phage phiJL001.;"
SCNpilot_cont_500_bf_scaffold_2846_14
unknown

Not on your lists

comp(10701..10889)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_15
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11225..12658)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G3S9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG71070.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
integrase family protein
SCNpilot_cont_500_bf_scaffold_2846_16
unknown

Not on your lists

comp(12886..13236)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2846_17
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13324..14706)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q749Z9_GEOSL
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
SCNpilot_cont_500_bf_scaffold_2846_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15294..17009
DNA (1716bp) protein (572aa)
chloride channel protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000379F5D1
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48994.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
chloride channel protein EriC
SCNpilot_cont_500_bf_scaffold_2846_19
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17161..17409
DNA (249bp) protein (83aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
Glycerol-3-phosphate acyltransferase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8D414_9BACL
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
SCNpilot_cont_500_bf_scaffold_2846_20
Smithella sp. D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17423..18265)
DNA (843bp) protein (281aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=1538639 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. D17.;"
Putative methyltransferase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AR49_PELPD
putative methyltransferase
Displaying 21 items

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