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SCNpilot_cont_500_bf_scaffold_22627

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_22627_1
unknown

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comp(1..750)
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_22627_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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1085..1924
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000372885F
Diacylglycerol kinase catalytic subunit {ECO:0000313|EMBL:GAK45472.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
diacylglycerol kinase catalytic subunit; K07029
SCNpilot_cont_500_bf_scaffold_22627_3
unknown

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comp(1930..2688)
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_22627_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2955..3545
DNA (591bp) protein (197aa)
alkylglycerone-phosphate synthase; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
Alkylglycerone-phosphate synthase {ECO:0000313|EMBL:ABS63288.1}; EC=2.5.1.26 {ECO:0000313|EMBL:ABS63288.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Alkylglycerone-phosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTQ5_PARL1
SCNpilot_cont_500_bf_scaffold_22627_5

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comp(3542..4186)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=G3CRG1_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:AEM45144.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
alpha/beta hydrolase domain-containing protein
SCNpilot_cont_500_bf_scaffold_22627_6
unknown

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comp(4431..4637)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_22627_7
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4697..5254)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030FDD16
Uncharacterized protein {ECO:0000313|EMBL:EAS49353.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_22627_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5251..6801)
DNA (1551bp) protein (517aa)
acyl-CoA synthetase; K12508 feruloyl-CoA synthase [EC:6.2.1.34] rbh
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTP7_PARL1 rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS63280.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_22627_9
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7574..8107
DNA (534bp) protein (178aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TRK8_TISMK
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:AFK55396.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_22627_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8097..8264
DNA (168bp) protein (56aa)
Phosphopantothenate synthase {ECO:0000313|EMBL:ETR77666.1}; EC=4.1.1.36 {ECO:0000313|EMBL:ETR77666.1};; EC=6.3.2.5 {ECO:0000313|EMBL:ETR77666.1};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
Phosphopantothenoylcysteine decarboxylase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H314_9PROT
SCNpilot_cont_500_bf_scaffold_22627_11
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

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8264..8722
DNA (459bp) protein (153aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VE95_9PROT
SCNpilot_cont_500_bf_scaffold_22627_12
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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8729..8848
DNA (120bp) protein (40aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZB9_PARL1
Predicted transcriptional regulator of cysteine synthase, Rrf2 family {ECO:0000313|EMBL:CDO59888.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
BadM/Rrf2 family transcriptional regulator
Displaying 12 items

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