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SCNpilot_cont_500_bf_scaffold_19360

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_19360_1
unknown

Not on your lists

comp(78..512)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19360_2
unknown

Not on your lists

comp(585..1187)
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19360_3
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1520..1801
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39YI3_GEOMG
glycoside hydrolase family protein
Uncharacterized protein {ECO:0000313|EMBL:ABB30691.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
SCNpilot_cont_500_bf_scaffold_19360_4
unknown

Not on your lists

comp(1793..2122)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19360_5
unknown

Not on your lists

comp(2249..2656)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19360_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3031..4005
DNA (975bp) protein (325aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4N3_9PROT rbh
Flagellin modification protein FlmB {ECO:0000313|EMBL:AIB16694.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_19360_7
unknown

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comp(4023..4352)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19360_8
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4488..5312)
DNA (825bp) protein (275aa)
flagellin n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039DBC07 rbh
Flagellin {ECO:0000313|EMBL:KIF26036.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
flagellin domain-containing protein; K02406 flagellin rbh
SCNpilot_cont_500_bf_scaffold_19360_9
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6675..7025)
DNA (351bp) protein (117aa)
Flagellar FlaF family protein n=2 Tax=Caulobacter RepID=B0SZU2_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KIF26037.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
flaF; flagellar biosynthesis regulatory protein FlaF; K06602 flagellar protein FlaF
SCNpilot_cont_500_bf_scaffold_19360_10
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6985..7332)
DNA (348bp) protein (116aa)
Flagellar repressor protein FlbT n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9N2_PHEZH
Putative flagellum biosynthesis repressor protein FlbT {ECO:0000313|EMBL:GAK34527.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
flbT; flagellar biosynthesis repressor FlbT; K06601 flagellar protein FlbT
SCNpilot_cont_500_bf_scaffold_19360_11
unknown

Not on your lists

comp(7438..7962)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19360_12
unknown

Not on your lists

comp(8119..8706)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19360_13
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9390..10001)
DNA (612bp) protein (204aa)
uroporphyrinogen III synthase HEM4 (EC:4.2.1.75)
uroporphyrinogen-III synthase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6E541
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCNpilot_cont_500_bf_scaffold_19360_14
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10004..10864)
DNA (861bp) protein (287aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
hemC; porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Porphobilinogen deaminase n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K2T9_9RHIZ
SCNpilot_cont_500_bf_scaffold_19360_15
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10935..12050
DNA (1116bp) protein (372aa)
putative DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_01445}; Short=t(6)A synthase {ECO:0000255|HAMAP-Rule:MF_01445};; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteoba
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=TSAD_OCHA4
SCNpilot_cont_500_bf_scaffold_19360_16
unknown

Not on your lists

comp(12065..12214)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 16 items

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