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SCNpilot_cont_500_bf_scaffold_11888

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11888_1
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1205)
DNA (1203bp) protein (401aa)
hypothetical protein; K01007 pyruvate, water dikinase [EC:2.7.9.2]
PEP-utilizing enzyme, mobile domain protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2JE80_9NOCA
PEP-utilizing protein {ECO:0000313|EMBL:CQD17504.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
SCNpilot_cont_500_bf_scaffold_11888_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1621..2454)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003607C5A
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:EYF08682.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pyruvate phosphate dikinase, PEP/pyruvate-binding domain protein
SCNpilot_cont_500_bf_scaffold_11888_3
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2479..3483)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E5J9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KCZ92144.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
SCNpilot_cont_500_bf_scaffold_11888_4
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3681..4154
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWD4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KCZ57433.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_11888_5
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4151..4606
DNA (456bp) protein (152aa)
Transcriptional regulator, AsnC family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9Z7_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KCZ57432.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
transcriptional regulator, AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
SCNpilot_cont_500_bf_scaffold_11888_6

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comp(4629..5306)
DNA (678bp) protein (226aa)
Nitroreductase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BXI5_HYPNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN99089.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitroreductase family protein rbh
SCNpilot_cont_500_bf_scaffold_11888_7
unknown

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5497..5733
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_11888_trna_1
unknown

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comp(5540..5613)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_11888_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5730..7571
DNA (1842bp) protein (614aa)
AsmA family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQJ2_PARL1
AsmA family protein; K07289 AsmA protein
AsmA family protein {ECO:0000313|EMBL:ABS62175.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_11888_9

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7568..8686
DNA (1119bp) protein (373aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=uncultured bacterium BLR7 RepID=C0INQ7_9BACT rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:ACN58943.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
polyamine/opine ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
Displaying 10 items

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