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SCNpilot_cont_500_bf_scaffold_12820

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12820_1
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..566)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F83D0A
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EHM02081.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_12820_2
unknown

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comp(664..858)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12820_3
unknown

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1167..1577
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12820_4
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1689..2915
DNA (1227bp) protein (409aa)
TonB-dependent Receptor Plug domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTV1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM02549.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_12820_5
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2972..3790
DNA (819bp) protein (273aa)
TonB dependent receptor n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVY9_9PROT
TonB dependent receptor {ECO:0000313|EMBL:EGY02567.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
tonB dependent receptor
SCNpilot_cont_500_bf_scaffold_12820_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3822..4298
DNA (477bp) protein (159aa)
NUDIX hydrolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQU4_PARL1
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABS62277.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_12820_7
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4305..4817)
DNA (513bp) protein (171aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
ogt; methylated-DNA-[protein]-cysteine S-methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1C0G0_9NEIS
SCNpilot_cont_500_bf_scaffold_12820_8
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4814..6247)
DNA (1434bp) protein (478aa)
3-methyladenine DNA glycosylase II {ECO:0000313|EMBL:KFC95471.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC95471.1};; EC=3.2.2.21 {ECO:0000313|EMBL:KFC95471.1};; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
AraC family transcriptional regulator; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] rbh
Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUQ0_9BACT
SCNpilot_cont_500_bf_scaffold_12820_9
unknown

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6351..6527
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12820_10
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6542..7063
DNA (522bp) protein (174aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZT82_9SPHN
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CDR13892.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
enoyl-CoA hydratase/isomerase
SCNpilot_cont_500_bf_scaffold_12820_11
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7092..7352
DNA (261bp) protein (87aa)
aacC; aminoglycoside N3-acetyltransferase (EC:2.3.1.81); K00662 aminoglycoside N3'-acetyltransferase [EC:2.3.1.81]
Aminoglycoside 3-N-acetyltransferase n=1 Tax=Halobacillus sp. BAB-2008 RepID=L5NBC7_9BACI
Aminoglycoside 3-N-acetyltransferase {ECO:0000313|EMBL:KJS13834.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
SCNpilot_cont_500_bf_scaffold_12820_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7303..7851
DNA (549bp) protein (183aa)
aminoglycoside N3-acetyltransferase n=1 Tax=Gluconobacter frateurii RepID=UPI00029A8B8D
Uncharacterized protein {ECO:0000313|EMBL:KKB10612.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
aminoglycoside N3-acetyltransferase
Displaying 12 items

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