ggKbase home page

SCNpilot_cont_500_bf_scaffold_3458

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3458_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1463)
DNA (1461bp) protein (487aa)
peptidoglycan glycosyltransferase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129]
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ABS64024.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABS64024.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
peptidoglycan glycosyltransferase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039F0253
SCNpilot_cont_500_bf_scaffold_3458_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1468..1854)
DNA (387bp) protein (129aa)
Protein TonB, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRG9_RHOCS
tonB; protein TonB
Protein TonB, putative {ECO:0000313|EMBL:ACI98055.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_500_bf_scaffold_3458_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1866..2792)
DNA (927bp) protein (309aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFL6_AZOBR
mraW; S-adenosyl-dependent methyl transferase
SCNpilot_cont_500_bf_scaffold_3458_4
alpha proteobacterium RS24, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2785..3258)
DNA (474bp) protein (158aa)
Protein MraZ n=1 Tax=alpha proteobacterium RS24 RepID=U2XRK1_9PROT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1397666 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium RS24.;"
mraZ; MraZ protein; K03925 MraZ protein
SCNpilot_cont_500_bf_scaffold_3458_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3536..4000
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00035FC2DB
Transcriptional regulator {ECO:0000313|EMBL:ETR76839.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3458_6
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4406..4882
DNA (477bp) protein (159aa)
GCN5-related N-acetyltransferase n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8WA30_STRFA
Uncharacterized protein {ECO:0000313|EMBL:KIF13478.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
GCN5-related N-acetyltransferase
SCNpilot_cont_500_bf_scaffold_3458_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4879..5583)
DNA (705bp) protein (235aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDL01058.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CDL01058.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
negative regulator of beta-lactamase expression; K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037748C7
SCNpilot_cont_500_bf_scaffold_3458_8
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5662..6927)
DNA (1266bp) protein (422aa)
Na+/H+-dicarboxylate symporter n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDR7_PHEZH rbh
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:KGB55969.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Na+/H+-dicarboxylate symporter rbh
SCNpilot_cont_500_bf_scaffold_3458_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6959..7687)
DNA (729bp) protein (243aa)
Heat shock protein DnaJ domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVT4_PARL1
heat shock protein DnaJ domain-containing protein; K05801 DnaJ like chaperone protein
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:ABS64017.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_3458_10
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8479..10323)
DNA (1845bp) protein (615aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:BAQ17000.1}; EC=2.1.1.13 {ECO:0000313|EMBL:BAQ17000.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Methionine synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVS9_PARL1
Displaying 10 items

View Taxonomy