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SCNpilot_cont_500_bf_scaffold_4183_18

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 33 / 55 MC: 1 BSCG 33 / 51 MC: 3 ASCG 8 / 38
Location: comp(18591..19331)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTF7_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 240.0
  • Bit_score: 281
  • Evalue 7.00e-73
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDO59281.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 243.0
  • Bit_score: 285
  • Evalue 5.20e-74
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 240.0
  • Bit_score: 281
  • Evalue 2.20e-73

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
CTCCGGCTGATGGCGATTGCCGATGAGGTGGTGGCCGCGCTGGAAGACAAGCGGCTGGTGTTCGCCTATCAGCCGATTGTCGAGGCCAGGACCCGCAAACCCGTTCATTACGAATGTCTGCTGCGCATGACCCGGCCCGACGGCACCATCGCGAGTGCGGGCCAGTTCGTTCCCGCCGCCGAACAATTGGGGCTGGTGCGCCTTGTCGATCGCCATGCGCTGGAAATGACGGTGGCGGCCCTTCATGCCCATTCCGATCTCGTGCTGGCGGTGAATGTTTCCGGCACCACGTCGGGCGATCCGTCCTGGCTGCACTCCTTCATCCAGTATGTGCAGAACAATCACACGGTCGCCCGGCGCATCATCGTGGAATTGACCGAGACCGCGGCGCTGCATCATTTCGAAGAGAATGCGCGCTTTGTCTCGCAATTGCGCGAGATGGGCTGTCGCGTCGCGATCGATGATTTCGGCGCCGGCTACACCTCATTCCGCAATCTGCAGATGCTCAGGGTGGACATGGTGAAGATCGATGGCGCCTATGTGCGCGATCTTTCCACCTCGCCCGAAAACCAGATTTTCGTGCGCACGCTGGTCGATCTCGCGAAGAATTTCGATCTGAAAACGGTGGCCGAATGGGTCGGTTCCGCCGAGGATGCCCAGATGCTGGAAAGTTTCGGCGTCGATTATTTCCAGGGCTTCCATTTCGGCGAGCCGCAGTTGAAGCCGGACTGGATGGCTTAG
PROTEIN sequence
Length: 247
LRLMAIADEVVAALEDKRLVFAYQPIVEARTRKPVHYECLLRMTRPDGTIASAGQFVPAAEQLGLVRLVDRHALEMTVAALHAHSDLVLAVNVSGTTSGDPSWLHSFIQYVQNNHTVARRIIVELTETAALHHFEENARFVSQLREMGCRVAIDDFGAGYTSFRNLQMLRVDMVKIDGAYVRDLSTSPENQIFVRTLVDLAKNFDLKTVAEWVGSAEDAQMLESFGVDYFQGFHFGEPQLKPDWMA*