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SCNpilot_cont_500_bf_scaffold_4115

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4115_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(600..932)
DNA (333bp) protein (111aa)
short-chain dehydrogenase n=1 Tax=Flavobacterium rivuli RepID=UPI0003678CF9
Short-chain dehydrogenase {ECO:0000313|EMBL:KGO92360.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_4115_2
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(957..1997)
DNA (1041bp) protein (347aa)
Luciferase family oxidoreductase, group 1 n=1 Tax=Imtechella halotolerans K1 RepID=I0W7Q9_9FLAO
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EID72425.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;"
luciferase family oxidoreductase, group 1
SCNpilot_cont_500_bf_scaffold_4115_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2002..2940)
DNA (939bp) protein (313aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZS1_DYAFD rbh
alcohol dehydrogenase zinc-binding domain-containing protein rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACT93549.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_500_bf_scaffold_4115_4
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3025..3372
DNA (348bp) protein (116aa)
Transcriptional regulator, HxlR family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2P7_SPHS2
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADZ80726.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_4115_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3437..4750)
DNA (1314bp) protein (438aa)
Relaxase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NPU5_9SPHI rbh
Relaxase/mobilization nuclease family protein rbh
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:ADY52221.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_500_bf_scaffold_4115_6
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4747..5190)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FW49_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07278.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_7
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5924..6691
DNA (768bp) protein (256aa)
conjugal transfer protein TraA n=1 Tax=Empedobacter brevis RepID=UPI000368C72F
Conjugal transfer protein TraA {ECO:0000313|EMBL:AIM37856.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
chromosome partitioning ATPase
SCNpilot_cont_500_bf_scaffold_4115_8
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6704..7108
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=C2G235_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK33908.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_9
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7122..7412
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M9_9FLAO
TraB protein {ECO:0000313|EMBL:BAP31934.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7424..7696
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5V1_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80116.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_4115_11
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7699..8331
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZD0_9FLAO
Conjugal transfer protein TraD {ECO:0000313|EMBL:KEQ31105.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_12
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8370..9743
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZY0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AIM38393.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_13
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10083..11201
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G237_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFF17268.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_14
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11228..12865
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G237_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AIM38393.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_15
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13085..13390
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7H3_PEDSD
hypothetical protein
Conjugative transposon protein TraE {ECO:0000313|EMBL:EFK34036.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_cont_500_bf_scaffold_4115_16
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13402..13734
DNA (333bp) protein (111aa)
Conjugate transposon protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MAX0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT28829.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4115_17
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13731..16238
DNA (2508bp) protein (836aa)
TraG family conjugation system ATPase n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZD9_9FLAO rbh
TraG family conjugation system ATPase rbh
Conjugation system ATPase, TraG family {ECO:0000313|EMBL:ADZ80110.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_4115_18
unknown

Not on your lists

16261..16476
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4115_19
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16538..17170
DNA (633bp) protein (211aa)
Conjugate transposon protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NPT7_9SPHI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY52236.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_500_bf_scaffold_4115_20
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17174..17683
DNA (510bp) protein (170aa)
TraJ family protein conjugative transposon n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7H7_PEDSD
TraJ family protein conjugative transposon
TraJ family protein conjugative transposon {ECO:0000313|EMBL:ADY52237.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Displaying 20 items

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