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SCNpilot_cont_500_bf_scaffold_20672

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_20672_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..859)
DNA (858bp) protein (286aa)
DNA recombination protein RmuC n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TV61_STEMA rbh
DNA recombination protein RmuC {ECO:0000313|EMBL:EMI47628.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
rmuC; DNA recombination protein RmuC; K09760 DNA recombination protein RmuC rbh
SCNpilot_cont_500_bf_scaffold_20672_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1089..1712
DNA (624bp) protein (208aa)
amino acid transporter LysE n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2046F
lysine exporter protein LysE/YggA
Amino acid transporter LysE {ECO:0000313|EMBL:EQM80935.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
SCNpilot_cont_500_bf_scaffold_20672_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1735..2094
DNA (360bp) protein (120aa)
Mll7394 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q986E6_RHILO
Uncharacterized protein {ECO:0000313|EMBL:AKC86743.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_20672_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2807..3643
DNA (837bp) protein (279aa)
amino acid permease n=1 Tax=Xanthomonas arboricola RepID=UPI0002DB6BF1
Amino acid permease {ECO:0000313|EMBL:KHL55375.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
amino acid-polyamine-organocation superfamily protein; K03294 basic amino acid/polyamine antiporter, APA family
SCNpilot_cont_500_bf_scaffold_20672_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3932..5173)
DNA (1242bp) protein (414aa)
membrane dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19] rbh
Membrane dipeptidase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CS67_STEMA rbh
Membrane dipeptidase {ECO:0000313|EMBL:EZP42685.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_500_bf_scaffold_20672_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5390..6604)
DNA (1215bp) protein (405aa)
PUA domain-containing protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] rbh
oxidoreductase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B59F54 rbh
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CCP19072.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
SCNpilot_cont_500_bf_scaffold_20672_7
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6834..7796
DNA (963bp) protein (321aa)
Integral membrane protein, TerC family n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYE6_STEMA rbh
putative efflux membrane protein; K05794 tellurite resistance protein TerC rbh
Export protein {ECO:0000313|EMBL:EED41225.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_cont_500_bf_scaffold_20672_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7946..8638
DNA (693bp) protein (231aa)
Probable integral membrane protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KUI3_STEMA rbh
putative rhomboid family transmembrane protein rbh
Stenotrophomonas maltophilia strain ZBG7B contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87702.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_500_bf_scaffold_20672_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8646..9653)
DNA (1008bp) protein (336aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] rbh
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TEJ4_STEMA rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EMI47617.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
Displaying 9 items

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