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SCNpilot_cont_500_bf_scaffold_4098

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4098_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..454
DNA (453bp) protein (151aa)
acetyl-CoA hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F462C9
Acetyl-CoA hydrolase {ECO:0000313|EMBL:AHY60543.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative acetyl-CoA hydrolase/transferase
SCNpilot_cont_500_bf_scaffold_4098_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(524..862)
DNA (339bp) protein (113aa)
Protein YegP n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6SKX6_ENTCL
protein YegP
Uncharacterized protein {ECO:0000313|EMBL:ETX63641.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
SCNpilot_cont_500_bf_scaffold_4098_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(995..1255)
DNA (261bp) protein (87aa)
Putative endonuclease containing a URI domain n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTB7_STEMA
putative endonuclease containing a URI domain; K07461 putative endonuclease
Nuclease {ECO:0000313|EMBL:KDE90542.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
SCNpilot_cont_500_bf_scaffold_4098_4
unknown

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comp(1274..1717)
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4098_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1865..2938)
DNA (1074bp) protein (358aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GK84_XANCT rbh
SCNpilot_cont_500_bf_scaffold_4098_6
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3245..3691
DNA (447bp) protein (149aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
Thioredoxin n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USM3_PSEUP
Thioredoxin {ECO:0000313|EMBL:KGM57764.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
SCNpilot_cont_500_bf_scaffold_4098_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3774..5417)
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=2 Tax=Stenotrophomonas RepID=B8L8B6_9GAMM rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
60 kDa chaperonin; K04077 chaperonin GroEL rbh
SCNpilot_cont_500_bf_scaffold_4098_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5476..5763)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=5 Tax=Stenotrophomonas RepID=CH10_STRM5
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
10 kDa chaperonin; K04078 chaperonin GroES
SCNpilot_cont_500_bf_scaffold_4098_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5979..6302
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZD67_XANCT
Uncharacterized protein {ECO:0000313|EMBL:KGM54744.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
divalent cation tolerance protein
SCNpilot_cont_500_bf_scaffold_4098_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6310..8637
DNA (2328bp) protein (776aa)
cytochrome C biogenesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FF0E27 rbh
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHY57478.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
C-type cytochrome biogenesis protein rbh
SCNpilot_cont_500_bf_scaffold_4098_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8639..8947
DNA (309bp) protein (103aa)
hypothetical protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003647A8F
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACF53330.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
Displaying 11 items

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