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SCNpilot_cont_500_bf_scaffold_4882

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4882_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1752
DNA (1752bp) protein (584aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
rnr; putative ribonuclease R (RNase R) (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] rbh
Ribonuclease R n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L314_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_4882_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1816..2316)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z8M3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59002.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4882_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2535..3278
DNA (744bp) protein (248aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
tRNA/rRNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] rbh
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=3 Tax=Xanthomonas campestris pv. translucens RepID=K8ZH00_XANCT rbh
SCNpilot_cont_500_bf_scaffold_4882_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3341..4051)
DNA (711bp) protein (237aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQ64_STRM5 rbh
phosphate uptake regulator PhoU; K02039 phosphate transport system protein rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_4882_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4245..5075)
DNA (831bp) protein (277aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
pstB; phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) n=3 Tax=Stenotrophomonas maltophilia RepID=I0KLK2_STEMA rbh
SCNpilot_cont_500_bf_scaffold_4882_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5110..5982)
DNA (873bp) protein (291aa)
phosphate transporter permease subunit PtsA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000303362B rbh
Phosphate ABC transporter permease {ECO:0000313|EMBL:AHY59645.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
phosphate ABC transporter permease; K02038 phosphate transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_4882_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5982..6950)
DNA (969bp) protein (323aa)
phosphate ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D6045F rbh
Phosphate ABC transporter permease {ECO:0000313|EMBL:AHY59644.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
pstC; putative phosphate transport system permease; K02037 phosphate transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_4882_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7040..7822)
DNA (783bp) protein (261aa)
phosphate-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FC3FEE rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
pstS; putative phosphate transport system substrate-binding exported periplasmic protein; K02040 phosphate transport system substrate-binding protein rbh
Displaying 8 items

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