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SCNpilot_cont_500_bf_scaffold_4963

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4963_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1058
DNA (1056bp) protein (352aa)
preprotein translocase subunit SecA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F34455
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_cont_500_bf_scaffold_4963_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1530..2483
DNA (954bp) protein (318aa)
mutator mutT protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E4A74C rbh
DNA mismatch repair protein MutT {ECO:0000313|EMBL:AHY60289.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
mutator MutT protein rbh
SCNpilot_cont_500_bf_scaffold_4963_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2473..3048)
DNA (576bp) protein (192aa)
Putative secreted protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BXE1_XANC5
Uncharacterized protein {ECO:0000313|EMBL:AHY60288.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4963_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3104..3934)
DNA (831bp) protein (277aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
metF; 5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] rbh
5,10-methylenetetrahydrofolate reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003816D44 rbh
SCNpilot_cont_500_bf_scaffold_4963_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4029..4787)
DNA (759bp) protein (253aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=C5T7P7_ACIDE
mmfC2; major facilitator superfamily permease
Uncharacterized protein {ECO:0000313|EMBL:EER59507.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_cont_500_bf_scaffold_4963_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5031..5585
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQA2_PSEUU rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26351.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_4963_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5592..6056)
DNA (465bp) protein (155aa)
IAA acetyltransferase n=1 Tax=Pseudomonas stutzeri RepID=UPI00036F9206
IAA acetyltransferase
IAA acetyltransferase {ECO:0000313|EMBL:AEJ05963.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
SCNpilot_cont_500_bf_scaffold_4963_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6162..6995)
DNA (834bp) protein (278aa)
Esterase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08UD7_STIAD
esterase family protein; K07017
Esterase family protein {ECO:0000313|EMBL:ADO72845.1}; Putative esterase superfamily {ECO:0000313|EMBL:EAU64091.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCNpilot_cont_500_bf_scaffold_4963_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7147..8592)
DNA (1446bp) protein (482aa)
sahH; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] rbh
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E266B7 rbh
SCNpilot_cont_500_bf_scaffold_4963_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8839..11232
DNA (2394bp) protein (798aa)
dipeptidyl aminopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304ABC5 rbh
Aminoacyl peptidase {ECO:0000313|EMBL:AHY60278.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_4963_11
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11156..12025)
DNA (870bp) protein (290aa)
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:GAE52920.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
SCNpilot_cont_500_bf_scaffold_4963_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13447..14244
DNA (798bp) protein (266aa)
ppc; phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
Phosphoenolpyruvate carboxylase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3GDE7_STEMA
SCNpilot_cont_500_bf_scaffold_4963_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14355..17114
DNA (2760bp) protein (920aa)
TPR repeat-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS25_9GAMM rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:EIL90016.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_4963_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17214..17729)
DNA (516bp) protein (172aa)
Cytosolic long-chain acyl-CoA thioester hydrolase family protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TQD8_STEMA
Cytosolic long-chain acyl-CoA thioester hydrolase family protein {ECO:0000313|EMBL:EMI51370.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
cytosolic long-chain acyl-CoA thioester hydrolase family protein
SCNpilot_cont_500_bf_scaffold_4963_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17863..19140)
DNA (1278bp) protein (426aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] rbh
S-adenosylmethionine synthase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQB2_PSEUU rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_500_bf_scaffold_4963_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19476..20405
DNA (930bp) protein (310aa)
Phosphate acyltransferase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L0P3_9GAMM
Phosphate acyltransferase family protein {ECO:0000313|EMBL:EZP47499.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative acyltransferase
Displaying 16 items

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