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SCNpilot_cont_500_bf_scaffold_5232

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5232_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..169
DNA (168bp) protein (56aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
sodB; superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
superoxide dismutase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030FF5C4
SCNpilot_cont_500_bf_scaffold_5232_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(262..597)
DNA (336bp) protein (112aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Alkylhydroperoxidase like protein, AhpD family n=2 Tax=Stenotrophomonas RepID=G0K4T4_STEMA
alkylhydroperoxidase
SCNpilot_cont_500_bf_scaffold_5232_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..1847)
DNA (1146bp) protein (382aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenot
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] rbh
phosphoribosylaminoimidazole carboxylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FB0A4C rbh
SCNpilot_cont_500_bf_scaffold_5232_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1844..2347)
DNA (504bp) protein (168aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] rbh
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E56FE6 rbh
SCNpilot_cont_500_bf_scaffold_5232_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2407..2676
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI000262ADC2
Uncharacterized protein {ECO:0000313|EMBL:EKU25013.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5232_6
Xanthomonas perforans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2676..3548
DNA (873bp) protein (291aa)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) {ECO:0000313|EMBL:EGD16248.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EGD16248.1};; TaxID=925776 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas perforans 91-118.;"
nadC; nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] rbh
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BLH4_9XANT rbh
SCNpilot_cont_500_bf_scaffold_5232_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3587..4540
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003040D06 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY59572.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5232_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4650..5000
DNA (351bp) protein (117aa)
membrane protein n=1 Tax=Xanthomonas oryzae RepID=UPI00037F08E2
Membrane protein {ECO:0000313|EMBL:AHY59573.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5232_9
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5069..5545)
DNA (477bp) protein (159aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B1CF9
Stringent starvation protein B {ECO:0000313|EMBL:EGD10673.1}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
ClpXP protease specificity-enhancing factor
SCNpilot_cont_500_bf_scaffold_5232_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5592..6227)
DNA (636bp) protein (212aa)
Stringent starvation protein A n=11 Tax=Xanthomonas RepID=G2LVX5_9XANT rbh
Stringent starvation protein A {ECO:0000313|EMBL:KHL58612.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
sspA; stringent starvation protein A; K03599 RNA polymerase-associated protein rbh
SCNpilot_cont_500_bf_scaffold_5232_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6379..7122)
DNA (744bp) protein (248aa)
Cytochrome c1 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR12_PSEUU rbh
cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit rbh
Cytochrome c1 {ECO:0000313|EMBL:ADV26684.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_5232_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7115..7369)
DNA (255bp) protein (85aa)
Cytochrome b n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR11_PSEUU
cytochrome b/b6 domain; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
Cytochrome b {ECO:0000256|RuleBase:RU003385}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Displaying 12 items

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