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SCNpilot_cont_500_bf_scaffold_5267

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5267_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..307
DNA (306bp) protein (102aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JW37_STEMA
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB
OmpA/MotB domain protein {ECO:0000313|EMBL:AEM49791.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_500_bf_scaffold_5267_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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389..868
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000306E5CA
Uncharacterized protein {ECO:0000313|EMBL:AHY60459.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5267_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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883..1161
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F3DA9F
Uncharacterized protein {ECO:0000313|EMBL:AHY60460.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5267_4
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1189..1731)
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Xanthomonas fuscans RepID=U4M2H9_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:EFF46408.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
Hypothetical Protein rbh
SCNpilot_cont_500_bf_scaffold_5267_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1850..2095
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=G0JVH2_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF50139.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_5267_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2245..3723)
DNA (1479bp) protein (493aa)
sodium:proton antiporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031769B9 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87122.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family rbh
SCNpilot_cont_500_bf_scaffold_5267_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3840..4637)
DNA (798bp) protein (266aa)
catalytic LigB subunit of aromatic ring-opening dioxygenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037D2214 rbh
Extradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:AJC46114.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
putative dioxygenase subunit rbh
SCNpilot_cont_500_bf_scaffold_5267_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4739..5647
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003070252 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AHY60467.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_5267_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5639..8590)
DNA (2952bp) protein (984aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000372A55E rbh
Diguanylate cyclase {ECO:0000313|EMBL:EQM76150.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_500_bf_scaffold_5267_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9551..10891
DNA (1341bp) protein (447aa)
putative ZINC METALLOpeptidase (EC:3.4.24.-); K07386 putative endopeptidase [EC:3.4.24.-] rbh
peptidase M13 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F0FC5B rbh
Peptidase M13 {ECO:0000313|EMBL:AHY60469.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_5267_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10976..11899)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FE9D21 rbh
Uncharacterized protein {ECO:0000313|EMBL:EMI51541.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5267_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12229..12831
DNA (603bp) protein (201aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003710030 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY60471.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5267_13
unknown

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comp(12868..13212)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5267_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13246..14019)
DNA (774bp) protein (258aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003046B10 rbh
Transcriptional regulator {ECO:0000313|EMBL:AHY60473.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Transcriptional regulator protein rbh
SCNpilot_cont_500_bf_scaffold_5267_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14009..14278)
DNA (270bp) protein (90aa)
autolysin sensor kinase (EC:2.7.3.-)
Putative two-component system sensor kinase n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RWJ1_XANCB
Histidine kinase {ECO:0000313|EMBL:AHY60474.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Displaying 15 items

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