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SCNpilot_cont_500_bf_scaffold_5379

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5379_1
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..122
DNA (120bp) protein (40aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00036C6F84
NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98010.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC
SCNpilot_cont_500_bf_scaffold_5379_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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208..1293
DNA (1086bp) protein (362aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F7132F rbh
Membrane protein {ECO:0000313|EMBL:AHY58610.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5379_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1315..2046)
DNA (732bp) protein (244aa)
Histidine utilization repressor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQ78_STEMA rbh
Histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor rbh
HTH-type transcriptional repressor yvoA {ECO:0000313|EMBL:EZP45496.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_500_bf_scaffold_5379_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2066..3436)
DNA (1371bp) protein (457aa)
N-formimino-L-glutamate deiminase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB64 rbh
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:AJC44907.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
metalo dependent hydrolase rbh
SCNpilot_cont_500_bf_scaffold_5379_5
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3498..4706
DNA (1209bp) protein (403aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hutI; imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] rbh
imidazolonepropionase n=1 Tax=Xanthomonas arboricola RepID=UPI0002ECCB98 rbh
SCNpilot_cont_500_bf_scaffold_5379_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4785..6320
DNA (1536bp) protein (512aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] rbh
histidine ammonia-lyase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F40C rbh
SCNpilot_cont_500_bf_scaffold_5379_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6460..7194
DNA (735bp) protein (245aa)
Formiminoglutamase {ECO:0000313|EMBL:CCP38333.1}; EC=3.5.3.8 {ECO:0000313|EMBL:CCP38333.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein; K01479 formiminoglutamase [EC:3.5.3.8] rbh
formimidoylglutamase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EDB923 rbh
Displaying 7 items

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