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SCNpilot_cont_500_bf_scaffold_2176

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2176_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1625
DNA (1623bp) protein (541aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Proline--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJA7_STEMA rbh
SCNpilot_cont_500_bf_scaffold_2176_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1848..2219
DNA (372bp) protein (124aa)
Histone family protein nucleoid-structuring protein H-NS n=2 Tax=Stenotrophomonas maltophilia RepID=B4SJ63_STRM5
Stenotrophomonas maltophilia strain ZBG7B contig_137, whole genome shotgun sequence {ECO:0000313|EMBL:KIP78601.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
histone family protein nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
SCNpilot_cont_500_bf_scaffold_2176_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2352..3626)
DNA (1275bp) protein (425aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035FA153 rbh
Membrane protein {ECO:0000313|EMBL:AHY60384.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2176_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3711..4823
DNA (1113bp) protein (371aa)
UPF0393 membrane protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CI52_STEMA rbh
UPF0393 membrane protein {ECO:0000313|EMBL:CCP09638.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein; K02066 putative ABC transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2176_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4836..5645
DNA (810bp) protein (270aa)
ABC transporter related n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJ60_STRM5 rbh
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein rbh
ABC transporter related {ECO:0000313|EMBL:ACF50228.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_2176_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5649..6575
DNA (927bp) protein (309aa)
ABC transporter substrate-binding protein n=2 Tax=Stenotrophomonas RepID=B8L126_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCP09636.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C; K02067 putative ABC transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2176_7
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6572..7216
DNA (645bp) protein (215aa)
ABC transporter n=1 Tax=Xanthomonas arboricola RepID=UPI0003616175
ABC transporter {ECO:0000313|EMBL:GAE53189.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2176_8
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7254..7601)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000318EAD4
Uncharacterized protein {ECO:0000313|EMBL:KHL26369.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2176_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7694..8440)
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000314F0CD rbh
SCNpilot_cont_500_bf_scaffold_2176_10
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8655..9008
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAH0_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ51520.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_500_bf_scaffold_2176_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9031..10302)
DNA (1272bp) protein (424aa)
Putative hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFV6_9GAMM
Putative hydrolase {ECO:0000313|EMBL:EIL98347.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase
SCNpilot_cont_500_bf_scaffold_2176_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10506..11597)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375CAF3 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23331.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09927 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2176_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11736..12371
DNA (636bp) protein (212aa)
GntR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJN9_9GAMM
GntR family transcriptional regulator {ECO:0000313|EMBL:EIL87430.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2176_14
unknown

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12603..12740
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2176_15
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12792..13478
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FGX9_XANCI
Uncharacterized protein {ECO:0000313|EMBL:CCG37616.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2176_16
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13478..14983
DNA (1506bp) protein (502aa)
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CAT3_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK59370.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
asparagine synthase (glutamine-hydrolyzing) rbh
Displaying 16 items

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