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SCNpilot_cont_500_bf_scaffold_2457

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2457_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..802)
DNA (801bp) protein (267aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL1_9GAMM
SCNpilot_cont_500_bf_scaffold_2457_2
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(870..1721)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM51208.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2457_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1714..2202)
DNA (489bp) protein (163aa)
DGC domain containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL0_9GAMM
Zinc-binding protein {ECO:0000313|EMBL:KGM53558.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2457_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2302..2937)
DNA (636bp) protein (212aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030D9BA0
Blc1 protein {ECO:0000313|EMBL:CCP13280.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
lipocalin family protein; K03098 outer membrane lipoprotein Blc
SCNpilot_cont_500_bf_scaffold_2457_5
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3033..3341
DNA (309bp) protein (103aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B68811
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ94894.1}; TaxID=383407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola (strain BLS256).;"
SCNpilot_cont_500_bf_scaffold_2457_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3410..5509
DNA (2100bp) protein (700aa)
prolyl oligopeptidase (EC:3.4.21.26); K01322 prolyl oligopeptidase [EC:3.4.21.26] rbh
prolyl oligopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000314C63C rbh
Prolyl oligopeptidase {ECO:0000313|EMBL:EQM78493.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
SCNpilot_cont_500_bf_scaffold_2457_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5604..6806)
DNA (1203bp) protein (401aa)
Putative aminotransferase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FHW0_STRMK rbh
hypothetical protein rbh
Putative aminotransferase {ECO:0000313|EMBL:CAQ47474.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_500_bf_scaffold_2457_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6906..9014
DNA (2109bp) protein (703aa)
oligopeptidase B (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83] rbh
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003608DBA rbh
Peptidase {ECO:0000313|EMBL:AHY57643.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_2457_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9044..9433
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJN6_STRM5
hypothetical protein; K09790 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF53177.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_2457_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9488..9688
DNA (201bp) protein (67aa)
sugar transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFB009
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH14179.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
SCNpilot_cont_500_bf_scaffold_2457_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9696..10532
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] rbh
diaminopimelate epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F9A9B rbh
SCNpilot_cont_500_bf_scaffold_2457_12
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10529..11206
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FFFF4D rbh
hypothetical protein; K09921 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC47719.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_500_bf_scaffold_2457_13
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11220..12110
DNA (891bp) protein (297aa)
tyrosine recombinase XerC n=1 Tax=Xanthomonas sacchari RepID=UPI000262B398 rbh
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC rbh
Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
SCNpilot_cont_500_bf_scaffold_2457_14
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12214..12711
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BJS6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KHM96827.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2457_15
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12699..13172)
DNA (474bp) protein (158aa)
Putative membrane protein n=2 Tax=Bordetella parapertussis RepID=K0MIK9_BORPB
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV60845.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein; K09943 hypothetical protein
SCNpilot_cont_500_bf_scaffold_2457_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13290..13736
DNA (447bp) protein (149aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ATP-dependent protease subunit HslV n=11 Tax=Stenotrophomonas RepID=HSLV_STRM5
Displaying 16 items

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