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SCNpilot_cont_500_bf_scaffold_2729

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2729_1
unknown

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3..152
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2729_2
unknown

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comp(1885..2313)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2729_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2435..3124)
DNA (690bp) protein (230aa)
Glutathione S-transferase {ECO:0000313|EMBL:EZP44465.1}; EC=2.5.1.18 {ECO:0000313|EMBL:EZP44465.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
gst6; glutathione S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KU13_STEMA rbh
SCNpilot_cont_500_bf_scaffold_2729_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3232..3813
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036E1C91 rbh
UPF0114 protein C405_18130 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2729_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4015..5010
DNA (996bp) protein (332aa)
cell envelope biogenesis protein TonB n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000313ED2D rbh
Energy transducer TonB {ECO:0000313|EMBL:AHY57215.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative TonB dependent receptor protein; K03832 periplasmic protein TonB rbh
SCNpilot_cont_500_bf_scaffold_2729_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5115..6308)
DNA (1194bp) protein (398aa)
ABC-type Na+ efflux pump, permease component n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G403_STEMA rbh
putative ABC transmembrane permease transport system protein; K09696 sodium transport system permease protein rbh
Putative ABC transmembrane permease component transport system protein {ECO:0000313|EMBL:CAQ47868.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_500_bf_scaffold_2729_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6305..7060)
DNA (756bp) protein (252aa)
ABC-type Na+ transport system, ATPase component n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BIK9_9XANT rbh
ABC-type Na {ECO:0000313|EMBL:KGQ18402.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
natA; Na+ extrusion ABC transporter ATP-binding protein; K09697 sodium transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2729_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7092..8624)
DNA (1533bp) protein (511aa)
TAP domain-containing protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USY2_PSEUP rbh
TAP domain-containing protein {ECO:0000313|EMBL:KGQ18401.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
TAP domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_2729_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8691..8888)
DNA (198bp) protein (66aa)
Cro/Cl family transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FCF196
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KGM53148.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
XRE family transcriptional regulator; K07729 putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2729_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8899..9480)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WXF6_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:AKC86727.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2729_11
unknown

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comp(9484..9648)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2729_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9797..10978)
DNA (1182bp) protein (394aa)
diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D7D304 rbh
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:ACF53574.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_2729_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11062..11772)
DNA (711bp) protein (237aa)
phenol hydroxylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035E873B rbh
Phenol hydroxylase {ECO:0000313|EMBL:AHY57206.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Phenol hydroxylase rbh
SCNpilot_cont_500_bf_scaffold_2729_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11911..12774
DNA (864bp) protein (288aa)
ABC transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036AD7A5 rbh
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CCH14570.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
SCNpilot_cont_500_bf_scaffold_2729_15
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12771..13565
DNA (795bp) protein (265aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311D098 rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
permease; K09686 antibiotic transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2729_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13607..14545
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
apbA; 2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] rbh
2-dehydropantoate 2-reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003091AE6 rbh
SCNpilot_cont_500_bf_scaffold_2729_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14542..15444
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SYD5_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78872.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
Nucleoside-diphosphate-sugar epimerases rbh
SCNpilot_cont_500_bf_scaffold_2729_18
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15557..16165
DNA (609bp) protein (203aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L274_9GAMM
OmpA/MotB domain protein {ECO:0000313|EMBL:EED38136.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
OmpA/MotB domain-containing protein
Displaying 18 items

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