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SCNpilot_cont_500_bf_scaffold_15042

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_15042_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..671)
DNA (669bp) protein (223aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
lpdA; putative dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoamide dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D8L9_STEMA
SCNpilot_cont_500_bf_scaffold_15042_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(689..2065)
DNA (1377bp) protein (459aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
pdhB; dihydrolipoamide acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] rbh
dihydrolipoamide acetyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D3C162 rbh
SCNpilot_cont_500_bf_scaffold_15042_3
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2226..2801)
DNA (576bp) protein (192aa)
DNA glycosylase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003738087
DNA glycosylase {ECO:0000313|EMBL:AJC46066.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_15042_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2999..3682
DNA (684bp) protein (228aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319F1F1
Membrane protein {ECO:0000313|EMBL:AHY57590.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative outer membrane Omp family protein; K07275 outer membrane protein
SCNpilot_cont_500_bf_scaffold_15042_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3615..4373)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPZ2_PSEUU rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_500_bf_scaffold_15042_6
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4484..5284)
DNA (801bp) protein (267aa)
Lipoprotein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SVU2_XANCT rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
Outer membrane lipoprotein; K02073 D-methionine transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_15042_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5313..5612)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VLP1_STEMA
putative ABC transporter permease; K02072 D-methionine transport system permease protein
Metal ABC transporter permease {ECO:0000313|EMBL:KDE88863.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
SCNpilot_cont_500_bf_scaffold_15042_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5609..5932)
DNA (324bp) protein (108aa)
metal ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000144C72E
D-methionine ABC transporter permease {ECO:0000313|EMBL:EZP45024.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter permease; K02072 D-methionine transport system permease protein
SCNpilot_cont_500_bf_scaffold_15042_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5929..6936)
DNA (1008bp) protein (336aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
DL-methionine transporter ATP-binding subunit n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TH58_STEMA rbh
metN; DL-methionine transporter ATP-binding subunit; K02071 D-methionine transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_15042_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7052..7894)
DNA (843bp) protein (281aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F38977 rbh
Membrane protein {ECO:0000313|EMBL:AHY57633.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
Displaying 10 items

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