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SCNpilot_cont_500_bf_scaffold_9130

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9130_1
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..224
DNA (222bp) protein (74aa)
Oar protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H6H8_XANCT
NODE_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96674.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
TonB-dependent outer membrane receptor oar-like protein
SCNpilot_cont_500_bf_scaffold_9130_2
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(386..2467)
DNA (2082bp) protein (694aa)
Gluconolactonase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BEC0_9XANT rbh
Gluconolactonase {ECO:0000313|EMBL:EGD09215.1}; Flags: Precursor;; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
SMP-30/gluconolaconase/LRE domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_9130_3
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3031..4104)
DNA (1074bp) protein (358aa)
chi18C; endo-chitinase chi18C (EC:3.2.1.14); K01183 chitinase [EC:3.2.1.14] rbh
Endo-chitinase, putative, chi18C {ECO:0000313|EMBL:ACE85832.1}; EC=3.2.1.14 {ECO:0000313|EMBL:ACE85832.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
Endo-chitinase, putative, chi18C n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PCT3_CELJU rbh
SCNpilot_cont_500_bf_scaffold_9130_4
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4350..5270)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036DF1D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGD10559.1}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
SCNpilot_cont_500_bf_scaffold_9130_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5463..6305
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HEL4_XANCT rbh
Uncharacterized protein {ECO:0000313|EMBL:ELQ16495.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
putative methyltransferase
SCNpilot_cont_500_bf_scaffold_9130_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6316..7509)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FCE86C rbh
Diguanylate cyclase {ECO:0000313|EMBL:AKC88334.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_500_bf_scaffold_9130_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7509..8912)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FCE86C
Diguanylate cyclase {ECO:0000313|EMBL:AKC88334.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_cont_500_bf_scaffold_9130_8
unknown

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9004..9702
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9130_9
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9821..10525
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N9D8_9GAMM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AJC22549.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9130_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10790..11086
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DH36_9PSED
Stenotrophomonas maltophilia strain ZBG7B contig_56, whole genome shotgun sequence {ECO:0000313|EMBL:KIP84358.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_500_bf_scaffold_9130_11
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11333..12262
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003669E95
Uncharacterized protein {ECO:0000313|EMBL:KFN42557.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Sensor protein lytS
Displaying 11 items

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