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SCNpilot_cont_500_bf_scaffold_9713

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9713_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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46..564
DNA (519bp) protein (173aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLJ5_9GAMM
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:EIL88086.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tripartite ATP-independent periplasmic transporter DctQ component
SCNpilot_cont_500_bf_scaffold_9713_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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568..1851
DNA (1284bp) protein (428aa)
TRAP dicarboxylate transporter subunit DctM n=2 Tax=Stenotrophomonas maltophilia RepID=M5TVE2_STEMA rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EZP42637.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TRAP dicarboxylate transporter subunit DctM rbh
SCNpilot_cont_500_bf_scaffold_9713_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1957..3030
DNA (1074bp) protein (358aa)
LacI family transcription regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D2E6F6 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AHY60927.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_9713_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3234..3989
DNA (756bp) protein (252aa)
2-deoxy-D-gluconate 3-dehydrogenase; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125] rbh
Short chain dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLV8_9GAMM rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EIL88199.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_9713_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4060..4698
DNA (639bp) protein (213aa)
hypothetical protein; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] rbh
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLV7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL88198.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_9713_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4828..5427
DNA (600bp) protein (200aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
folE; GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16] rbh
GTP cyclohydrolase I n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000376B8EF rbh
SCNpilot_cont_500_bf_scaffold_9713_7
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5497..5874
DNA (378bp) protein (126aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B33903
Leukotriene C4 synthase like protein {ECO:0000313|EMBL:EGG94942.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
eicosanoid and glutathione metabolism membrane protein
SCNpilot_cont_500_bf_scaffold_9713_8
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6194..6343)
DNA (150bp) protein (50aa)
TonB dependent receptor family protein, partial n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B4A694
Uncharacterized protein {ECO:0000313|EMBL:KFN49079.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein
Displaying 8 items

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