ggKbase home page

SCNpilot_cont_500_bf_scaffold_13655

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13655_1
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..522
DNA (522bp) protein (174aa)
TonB-dependent receptor {ECO:0000313|EMBL:KGO99170.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
TonB-dependent receptor id=2528236 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_13655_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

764..3748
DNA (2985bp) protein (995aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC85573.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Multi-sensor hybrid histidine kinase id=2528229 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_13655_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3687..4046
DNA (360bp) protein (120aa)
histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000370A7D1
putative two component regulator sensor histidine kinase/response regulator fusion transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_500_bf_scaffold_13655_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4066..4422)
DNA (357bp) protein (119aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX95_PSEUU
alkylhydroperoxidase like protein
SCNpilot_cont_500_bf_scaffold_13655_5
unknown

Not on your lists

comp(4485..4607)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_13655_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4759..5112)
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI47_9GAMM
ArsR; ArsR family transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_13655_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5115..5504)
DNA (390bp) protein (130aa)
Rhodanese-like domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI48_9GAMM
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Rhodanese domain containing protein
SCNpilot_cont_500_bf_scaffold_13655_8
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5602..5805
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN42009.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
A33Mdanese-related sulfurtransferase id=2556635 bin=GWF1_Xanthomonadales_69_6 species=uncultured bacterium A1Q1_fos_600 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_cont_500_bf_scaffold_13655_9
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5830..6384
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037A9032
NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97770.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
RND family efflux transporter, MFP subunit
Displaying 9 items

View Taxonomy