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SCNpilot_cont_500_bf_scaffold_23792

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_23792_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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207..1385
DNA (1179bp) protein (393aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2FAC8 rbh
Membrane protein {ECO:0000313|EMBL:AHY61030.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Benzoate permease; K05782 benzoate membrane transport protein rbh
SCNpilot_cont_500_bf_scaffold_23792_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1428..2150)
DNA (723bp) protein (241aa)
transglycosylase; K01792 glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
Epimerase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z8C2_9XANT
Epimerase {ECO:0000313|EMBL:AHY61028.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_23792_3
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2270..3106
DNA (837bp) protein (279aa)
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:GAE53076.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
SCNpilot_cont_500_bf_scaffold_23792_4
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3224..3568
DNA (345bp) protein (115aa)
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:GAE53076.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
SCNpilot_cont_500_bf_scaffold_23792_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3597..4571)
DNA (975bp) protein (325aa)
methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DCF69D rbh
Methyltransferase {ECO:0000313|EMBL:AHY61027.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_23792_6
unknown

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comp(4712..5629)
DNA (918bp) protein (306aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_23792_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5836..6123)
DNA (288bp) protein (96aa)
UPF0225 protein EPM1_1004 n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3GB80_STEMA
UPF0225 protein BW38_03997 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein; K09858 SEC-C motif domain protein
SCNpilot_cont_500_bf_scaffold_23792_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6312..6701
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SNT1_STRM5
Membrane protein {ECO:0000313|EMBL:AHY61023.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07090
SCNpilot_cont_500_bf_scaffold_23792_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6701..7042
DNA (342bp) protein (114aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036D4C20
Membrane protein {ECO:0000313|EMBL:AHY61023.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07090
SCNpilot_cont_500_bf_scaffold_23792_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7142..7885
DNA (744bp) protein (248aa)
short-chain dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002ED4A33 rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV28885.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_23792_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8041..8388
DNA (348bp) protein (116aa)
Iron complex outermembrane recepter protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z9U4_9XANT
btuB; TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Displaying 11 items

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