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SCNpilot_cont_500_bf_scaffold_1675

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1675_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..317)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030AFE91
Uncharacterized protein {ECO:0000313|EMBL:AKC86601.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
YecA family protein; K07039 uncharacterized protein
SCNpilot_cont_500_bf_scaffold_1675_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(467..1084)
DNA (618bp) protein (206aa)
Uracil-DNA glycosylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHJ5_9GAMM
Uracil-DNA glycosylase {ECO:0000313|EMBL:EIL98936.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
uracil-DNA glycosylase
SCNpilot_cont_500_bf_scaffold_1675_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1167..2057
DNA (891bp) protein (297aa)
haloalkane dehalogenase; K01563 haloalkane dehalogenase [EC:3.8.1.5] rbh
Haloalkane dehalogenase n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CLX1_XANCA rbh
Haloalkane dehalogenase {ECO:0000313|EMBL:AEL09164.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
SCNpilot_cont_500_bf_scaffold_1675_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2277..2705)
DNA (429bp) protein (143aa)
ferredoxin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037BF491
Ferredoxin {ECO:0000313|EMBL:KDE87871.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
putative ferredoxin; K06940
SCNpilot_cont_500_bf_scaffold_1675_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2808..4460
DNA (1653bp) protein (551aa)
peptide synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036CD9FE rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase/Peptide synthase rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase/Peptide synthase {ECO:0000313|EMBL:CCH10779.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
SCNpilot_cont_500_bf_scaffold_1675_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4457..5455
DNA (999bp) protein (333aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein in hypothetical gene cluster n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KI91_STEMA rbh
3-beta hydroxysteroid dehydrogenase {ECO:0000313|EMBL:AHY60772.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
3-beta hydroxysteroid dehydrogenase/isomerase family protein in hypothetical gene cluster rbh
SCNpilot_cont_500_bf_scaffold_1675_7
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5558..5713
DNA (156bp) protein (52aa)
UPF0391 membrane protein Smal_0172 n=4 Tax=Stenotrophomonas RepID=B4SSJ5_STRM5
hypothetical protein
UPF0391 membrane protein SSKA14_1335 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_cont_500_bf_scaffold_1675_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5744..6913)
DNA (1170bp) protein (390aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7N1_ACISJ rbh
major facilitator superfamily transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABM42256.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_cont_500_bf_scaffold_1675_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7018..8121)
DNA (1104bp) protein (368aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E17695 rbh
SCNpilot_cont_500_bf_scaffold_1675_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8291..8938
DNA (648bp) protein (216aa)
sterol-binding protein, partial n=1 Tax=Xanthomonas arboricola RepID=UPI00036AE299 rbh
Sterol-binding protein {ECO:0000313|EMBL:AKC80414.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
sterol-binding domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1675_11
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8935..10602
DNA (1668bp) protein (556aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
ubiquinone biosynthesis protein UbiB n=1 Tax=Xanthomonas sacchari RepID=UPI0002629FA6 rbh
2-polyprenylphenol 6-hydroxylase; K03688 ubiquinone biosynthesis protein rbh
SCNpilot_cont_500_bf_scaffold_1675_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10599..11273
DNA (675bp) protein (225aa)
Qnr n=1 Tax=Stenotrophomonas maltophilia RepID=B5T012_STEMA rbh
Qnr {ECO:0000313|EMBL:ACG60500.1}; SmQnr1 {ECO:0000313|EMBL:BAG72110.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
qnrB; putative fluoroquinolone resistance protein rbh
SCNpilot_cont_500_bf_scaffold_1675_13
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11368..12132
DNA (765bp) protein (255aa)
pseudouridylate synthase; K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26] rbh
Pseudouridine synthase n=1 Tax=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) RepID=Q5H618_XANOR rbh
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:AAW73602.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
SCNpilot_cont_500_bf_scaffold_1675_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12157..14169)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ05_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKC86938.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1675_15
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14381..16177
DNA (1797bp) protein (599aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K8R0_AZOSB rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC88316.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1675_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16245..16634)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW65_PSEUP
Uncharacterized protein {ECO:0000313|EMBL:KGM51887.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1675_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16702..17685)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WII7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99278.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
TPR repeat-containing protein
SCNpilot_cont_500_bf_scaffold_1675_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17834..20362
DNA (2529bp) protein (843aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBR8_9GAMM rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL96909.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyl transferase family protein rbh
SCNpilot_cont_500_bf_scaffold_1675_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20380..21000
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBR9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96910.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative N-acetylglucosaminyl transferase
Displaying 19 items

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