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SCNpilot_cont_500_bf_scaffold_10792

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10792_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..254)
DNA (252bp) protein (84aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z880_9XANT
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AHY58369.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_10792_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(316..1698)
DNA (1383bp) protein (461aa)
Outer membrane cobalamin receptor protein n=1 Tax=Caulobacter sp. AP07 RepID=J2P047_9CAUL
TonB-dependent receptor {ECO:0000313|EMBL:AHY58368.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_10792_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1670..3619)
DNA (1950bp) protein (650aa)
TonB-dependent receptor n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKA8_CAUST
TonB-dependent receptor {ECO:0000313|EMBL:AHY58368.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_10792_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3682..4140
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VP86_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP80119.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10792_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4178..5968
DNA (1791bp) protein (597aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-] rbh
acyl-CoA dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037CC511 rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACF52477.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_10792_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6046..6711
DNA (666bp) protein (222aa)
HNH endonuclease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EB797C rbh
Stenotrophomonas maltophilia strain ZBG7B contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87747.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
HNH endonuclease rbh
SCNpilot_cont_500_bf_scaffold_10792_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7039..8907
DNA (1869bp) protein (623aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; EC=2.2.1.7 {ECO:0000255|HAMAP-Rule:MF_00315};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; Short=DXP synthase {ECO:0000255|HAMAP-Rule:MF_00315};; Short=DXPS {ECO:0000255|HAMAP-Rule:MF_00315};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FIE5_STEMA rbh
SCNpilot_cont_500_bf_scaffold_10792_8

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9246..10286
DNA (1041bp) protein (347aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-lactamase (EC:3.5.2.6); K01467 beta-lactamase [EC:3.5.2.6]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D8305
Displaying 8 items

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