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SCNpilot_cont_500_bf_scaffold_8188

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8188_1
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..949
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T130_XANCT
Uncharacterized protein {ECO:0000313|EMBL:KGO97835.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8188_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1190..2278
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XFA2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38424.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
metallophosphoesterase; K07098
SCNpilot_cont_500_bf_scaffold_8188_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2292..2699)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00035D52CD
mgtc/sapb transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_500_bf_scaffold_8188_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2905..3603)
DNA (699bp) protein (233aa)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
masA; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase (EC:3.1.3.77); K09880 enolase-phosphatase E1 [EC:3.1.3.77] rbh
Enolase-phosphatase E1 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KG21_STEMA rbh
SCNpilot_cont_500_bf_scaffold_8188_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3770..4324)
DNA (555bp) protein (185aa)
mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC:1.13.11.54); K08967 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] rbh
Acireductone dioxygenase n=4 Tax=Stenotrophomonas maltophilia RepID=MTND_STRMK rbh
Acireductone dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00009702}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00090345}; Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malt
SCNpilot_cont_500_bf_scaffold_8188_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4399..5055)
DNA (657bp) protein (219aa)
Methylthioribulose-1-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_01677}; Short=MTRu-1-P dehydratase {ECO:0000256|HAMAP-Rule:MF_01677};; EC=4.2.1.109 {ECO:0000256|HAMAP-Rule:MF_01677};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
mtnB; Methylthioribulose-1-phosphate dehydratase (EC:4.2.1.109); K08964 methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] rbh
methylthioribulose-1-phosphate dehydratase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037B84FC rbh
SCNpilot_cont_500_bf_scaffold_8188_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5255..6688)
DNA (1434bp) protein (478aa)
amino acid permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D8772D rbh
Amino acid permease {ECO:0000313|EMBL:AHY59185.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Amino acid transporters; K03294 basic amino acid/polyamine antiporter, APA family rbh
SCNpilot_cont_500_bf_scaffold_8188_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6753..7691)
DNA (939bp) protein (313aa)
amino acid permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000305DC8B
Amino acid permease {ECO:0000313|EMBL:AHY59184.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family
SCNpilot_cont_500_bf_scaffold_8188_9
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8324..8881
DNA (558bp) protein (186aa)
NUDIX hydrolase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A60F
NUDIX hydrolase {ECO:0000313|EMBL:ELQ00665.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
NUDIX hydrolase
SCNpilot_cont_500_bf_scaffold_8188_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8955..9602)
DNA (648bp) protein (216aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Putative D-3-phosphoglycerate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FPQ0_STRMK
Putative D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CAQ45693.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Displaying 10 items

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