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SCNpilot_cont_500_bf_scaffold_8260

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8260_1
unknown

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3..119
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8260_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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406..1041
DNA (636bp) protein (212aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CAE1_9XANT
putative outer membrane lipoprotein
OmpA family outer membrane lipoprotein {ECO:0000313|EMBL:EKU25117.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
SCNpilot_cont_500_bf_scaffold_8260_3
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1113..2123)
DNA (1011bp) protein (337aa)
Putative signal transduction protein n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RVZ7_XANCB
GGDEF domain-containing protein {ECO:0000313|EMBL:GAE52017.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
putative signal protein with GGDEF domain
SCNpilot_cont_500_bf_scaffold_8260_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2349..4832
DNA (2484bp) protein (828aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC8390 rbh
Exported oligopeptidase {ECO:0000313|EMBL:EZP45517.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_8260_5
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5372..5704
DNA (333bp) protein (111aa)
beta-lactamase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Beta-lactamase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FI36_FLAJ1
Beta-lactamase {ECO:0000313|EMBL:ABQ05135.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_cont_500_bf_scaffold_8260_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5701..6420
DNA (720bp) protein (240aa)
beta-lactamase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Beta-lactamase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAE2_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EED37789.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_cont_500_bf_scaffold_8260_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6845..7108
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311B3F8
hypothetical protein; K06078 murein lipoprotein
Membrane protein {ECO:0000313|EMBL:AHY57460.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_8260_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7221..7952
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377DC45 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM55748.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_8260_9
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8071..8577)
DNA (507bp) protein (169aa)
acetyltransferase; K03824 putative acetyltransferase [EC:2.3.1.-]
Putative acetyltransferase, GNAT family n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I8I2_PSEE4
Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:CAK16046.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
SCNpilot_cont_500_bf_scaffold_8260_10
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8720..9040)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B8D0E
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_500_bf_scaffold_8260_11
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9037..9606)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035FCFC8
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_cont_500_bf_scaffold_8260_12
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9599..9964)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E734D
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_cont_500_bf_scaffold_8260_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10035..11483)
DNA (1449bp) protein (483aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF9_9GAMM rbh
beta-lactamase rbh
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_cont_500_bf_scaffold_8260_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11729..13396)
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] rbh
urocanate hydratase n=1 Tax=Dyella japonica RepID=UPI0002E14830 rbh
Displaying 14 items

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