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SCNpilot_cont_500_bf_scaffold_8693

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8693_1
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..981
DNA (981bp) protein (327aa)
ABC transporter n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVB8_PSEUP rbh
ABC transporter rbh
ABC transporter {ECO:0000313|EMBL:AER57579.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_500_bf_scaffold_8693_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1024..2286
DNA (1263bp) protein (421aa)
histidine kinase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E1A897 rbh
Fis family transcriptional regulator rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADV28326.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_500_bf_scaffold_8693_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2267..3643
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Two component system sensor histidine kinase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TXP3_STEMA rbh
putative two component system sensor histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_8693_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3813..5180)
DNA (1368bp) protein (456aa)
glmU; bifunctional protein glmu [includes: UDP-N-acetylglucosamine pyrophosphorylase and glucosamine-1-phosphate N-acetyltransferase) (EC:2.7.7.23 2.3.1.157); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] rbh
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037055C9 rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_500_bf_scaffold_8693_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5458..5841
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0SVS0_XANCT
Uncharacterized protein {ECO:0000313|EMBL:ELQ16110.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8693_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5977..6399)
DNA (423bp) protein (141aa)
ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
F0F1 ATP synthase subunit epsilon n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DF01AC
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
SCNpilot_cont_500_bf_scaffold_8693_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6483..6920)
DNA (438bp) protein (146aa)
atpD; ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ATP synthase subunit beta n=2 Tax=Stenotrophomonas RepID=B8L8R2_9GAMM
SCNpilot_cont_500_bf_scaffold_8693_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7424..7789
DNA (366bp) protein (122aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
SCNpilot_cont_500_bf_scaffold_8693_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7847..8710)
DNA (864bp) protein (288aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] rbh
ATP synthase gamma chain n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D3Z2_STEMA rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
SCNpilot_cont_500_bf_scaffold_8693_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8789..10336)
DNA (1548bp) protein (516aa)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] rbh
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
ATP synthase subunit alpha n=3 Tax=Stenotrophomonas maltophilia RepID=ATPA_STRMK rbh
SCNpilot_cont_500_bf_scaffold_8693_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10381..10908)
DNA (528bp) protein (176aa)
atpH; F0F1 ATP synthase subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
F0F1 ATP synthase subunit delta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F84F81
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_500_bf_scaffold_8693_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10912..11382)
DNA (471bp) protein (157aa)
ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=4 Tax=Stenotrophomonas maltophilia RepID=ATPF_STRMK
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
SCNpilot_cont_500_bf_scaffold_8693_13
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11494..11721)
DNA (228bp) protein (76aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
F0F1 ATP synthase subunit C n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A17BFD
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Displaying 13 items

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